Mariniblastus fucicola: MFFC18_45410
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Entry
MFFC18_45410 CDS
T06181
Symbol
sigA_2
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
mff
Mariniblastus fucicola
Pathway
mff02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mff00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MFFC18_45410 (sigA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mff03021
]
MFFC18_45410 (sigA_2)
Transcription machinery [BR:
mff03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MFFC18_45410 (sigA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Spectrin
Motif
Other DBs
NCBI-ProteinID:
QEG24620
UniProt:
A0A5B9PH56
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All DBs
Position
5759858..5761405
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AA seq
515 aa
AA seq
DB search
MYDTLIEEFNGEATRTRVPDDGIQKAIAEADPAAPTNETRVQPVPDPKASEFTGIDESEG
WSDDPVRMYLTQMGEIPLLTRQEEITLAKRIEDTRRQFRTRLLESDYVIKAAYKTLVRVY
RGELPFDRTVQVSVTDRLEKEQILGRIGHNLKTLSILLKQNRHDFLTAYSKTASAKKRHE
AWENLGRRRRRCVRLIEELGLRTQRIENHIRMIEDFSERVDELQSKINKHKKTKKPADER
EAWVQEMRGILLACQETPSSLRNRCNFLRDVYSRYQKAKRELSEGNLRLVVSIAKKYRNR
GLSFLDLIQEGNAGLMRAVDKFEYRRGFKFCTYATWWIRQAITRAVADQSRTIRIPVHMV
ETMSRVRSVSRQLLQELGREPTLEEVARRSETTVEEARRVLAMSRYPISLDRPVGNSEDS
HFGDLLPDGEAESPSIGASQEMLKGRIQDVLKTLSYREREIIKLRYGLGDGYSYTLEEVG
HIFKVTRERIRQIEAKAVRKLQQPSRSQELVGFLD
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgatacccttatcgaagaatttaacggcgaagcaacaagaacacgagtccctgac
gatggcattcaaaaagctatcgccgaagcggatccggcagcgcccacaaatgaaacgaga
gttcaacctgttcctgaccccaaggccagtgagttcactggcatcgacgagtcagagggc
tggtcggacgatccggtacgcatgtacctgacgcagatgggtgagattcctttgctgacc
cgtcaggaagaaatcacgctggccaaacgcatcgaagacacacgtcgtcagttccgcaca
cgtttgctggaatcagattacgtcatcaaggctgcttacaagacgctggttcgagtctac
cgcggcgagttgccgttcgatcgtaccgttcaggtttccgttacggatcgtcttgagaaa
gaacagattctcggacgcatcggccacaacctgaaaacgttgtcgatcctgctcaagcaa
aatcgtcacgacttcctgaccgcctactccaaaactgcttcggccaagaaacgccacgaa
gcatgggagaatttgggccgtcgtcgtcgtcgctgcgttcgcctgatcgaagaactggga
cttcgtacccagcgaatcgaaaaccacattcgcatgatcgaagacttcagcgaacgtgtg
gatgaactgcagagcaaaatcaacaagcacaagaaaacaaagaagcctgcggacgagcgt
gaagcttgggttcaggaaatgcgtggtattcttctggcctgccaggaaacgcccagcagc
ctgcggaaccgatgcaactttctgcgtgacgtttacagtcgctaccagaaagccaaacgc
gaactgtccgaaggtaaccttcgcctggtggtttcgatcgccaagaagtatcgcaaccgt
ggtttgagcttcctggatttgattcaggaaggcaacgctggcttgatgcgtgcggtcgac
aaattcgaataccgtcgtggtttcaagttctgtacttacgccacatggtggattcgacag
gcgattacccgcgctgtcgccgaccagagccgtacgatccgtattccggttcacatggtt
gagacaatgtctcgcgtgcgttcggtttcacgtcaactgcttcaggaacttggccgcgag
ccgactctcgaagaagtcgcacgtcgcagcgaaacgactgtcgaagaagcacgccgcgta
ctcgcgatgagccgctatccgatcagccttgatcgtccggtcggcaacagcgaagacagc
cacttcggcgatcttctgccagacggtgaagccgaaagcccatcgatcggtgcgtcgcag
gaaatgctcaaaggtcggattcaggatgtcctgaaaacgttgagctatcgtgaacgcgag
attatcaaacttcgttacggtttgggcgatggctacagctacacgctggaagaagtcggc
cacatcttcaaggtgacgcgtgagcgtatccgtcagatcgaagccaaagccgttcgcaag
ctgcagcaaccaagccgcagccaggaactggttggcttcctggactaa
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