Mariniblastus fucicola: MFFC18_46200
Help
Entry
MFFC18_46200 CDS
T06181
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mff
Mariniblastus fucicola
Pathway
mff03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mff00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MFFC18_46200 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mff03019
]
MFFC18_46200 (deaD)
03009 Ribosome biogenesis [BR:
mff03009
]
MFFC18_46200 (deaD)
Enzymes [BR:
mff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MFFC18_46200 (deaD)
Messenger RNA biogenesis [BR:
mff03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MFFC18_46200 (deaD)
Ribosome biogenesis [BR:
mff03009
]
Prokaryotic type
rRNA helicases
MFFC18_46200 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
DUF6702
AAA_19
Cas3-like_C_2
SP_0191-like
Motif
Other DBs
NCBI-ProteinID:
QEG24698
UniProt:
A0A5B9PE59
LinkDB
All DBs
Position
complement(5856951..5859224)
Genome browser
AA seq
757 aa
AA seq
DB search
MTPNSENNETKKSIPTVVVFDTPDNDEAQSQSQTQPKVEVETQVEVAQPKKTLSEEILAS
AAATASVETATEEAESKKGDAKQAETAQDAEPAKVASEASADEAQAKTKAEEIVVEPGKV
EKIPAETATAAAEREDNRVRFRDLPLSSNVVKAVEKSGYEFPTAIQEQIIPHMLDGRDVM
AQSQTGSGKTAAFALPILSKLDTNTKLPHVLVLAPTRELAIQVAESFEKYASQIPRFSAV
AIYGGQDYEVQFRKLRRGVQVVVGTPGRVIDHIKRGTLDLSKLTTLVLDEADEMLNMGFL
DDVEYVLTKTPRDRQVTLFSATFNNDIKKIAQRYLNDPIQIKIQRKTITADSIRQRAIIC
SNRDKIDLLIQMLEVEETDGVLVFTRTKDATIQVAEQLNRAGLKVAALNGDMPQKTRERT
IDRLKAERLDIVVATDVAARGLDVTRVSHVFNYDLPEGSEPYIHRVGRTGRAGRKGEAII
FVTHAQRGKLRMIERATKKTIEIVDPPSSKHINAMRVKTLRDTITKTIAESDLTRFEKLI
ASHAEETGESMDKIAAALAFIGQRGEEFFSTDKPKRQRRERDDFDGRGEREPRGRRESRP
PESGMTRYRIEVGRRDGVKPGNIVGAVANEAGIEGKSIGPIQIYSAHTTIDLPSGMPDDV
RDILENTRVVGRELRIREATPKDEIQEDRGRGRGGFSGGRGRNDRRGGGGGRDSRGGRDS
RGGGGGRDFRGGKKDFRGKKKPGGRTFAKVKSKRQSD
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgactccaaactctgaaaacaacgaaaccaaaaaatcaattccaaccgtcgtcgtattt
gacactccggacaacgacgaagctcaatcgcagagccaaactcagcccaaagtggaagtt
gaaacacaagtcgaagtcgcccaaccaaagaaaacgctgtcggaagaaattcttgcatcg
gctgccgcgactgccagcgtagagaccgccactgaagaagctgaatccaaaaaaggtgac
gcgaaacaggccgaaaccgcacaagatgctgaaccggcgaaagttgcttcggaagcaagc
gctgacgaagctcaggcgaaaacgaaagccgaagaaatcgtcgtcgagcctggcaaggtt
gaaaaaattccagctgaaactgcgaccgctgctgccgagcgagaggacaaccgtgtccgc
tttcgcgatttgccgttgtcgtccaacgtcgttaaggccgttgaaaaatctggctatgag
tttccgactgcgattcaggaacagatcatcccgcacatgcttgacggccgtgatgtgatg
gctcaatcccaaacgggttccggaaagactgctgctttcgcgcttccgattctctcaaag
ctcgataccaatacgaaacttccacacgttctggtgcttgctcccacccgtgagctggcg
attcaggttgccgagtcattcgagaagtacgcctcgcaaattccaaggttctcagccgtc
gcgatttacggtggtcaggactatgaagtccagttccgtaaacttcgtcgtggcgttcaa
gtcgttgtcggaacgccgggccgggtcatcgaccacatcaaacgtggcactctggacctg
agtaaactgaccacgctggtgctcgacgaagcggacgagatgctcaacatgggttttctc
gatgacgttgaatacgttctgacaaagacgcctcgcgaccgccaggtgacgctgttctcg
gccaccttcaacaatgacatcaaaaagatcgctcagcgttatctcaacgatccgatccaa
atcaagattcagcgcaaaacgatcaccgcggattcgattcgccagcgagccatcatttgc
tccaaccgggacaaaattgacttgttgattcaaatgctggaagtcgaagagaccgacggc
gttcttgttttcacccgaaccaaagacgcaacgattcaggtcgccgaacagctcaaccgg
gccgggctgaaagtcgcggctctcaatggtgacatgccgcaaaagacccgcgagcgaacg
atcgatcgactcaaagcagaacggctcgatatcgtggtcgcaacggatgttgctgctcgt
ggtctggacgtgacgcgagtcagccacgttttcaactacgatcttcccgaaggcagcgag
ccttacattcaccgcgttgggcgaactggtcgcgcgggtcgcaaaggcgaagccatcatt
ttcgtgacgcacgcacagcgtggcaaactgcggatgattgagcgggctacgaaaaagacg
atcgagatcgttgatccgccttcttcgaagcacatcaatgcgatgcgtgtcaaaacgctt
cgtgacacgatcaccaaaacgatcgcagaatcagatttgacgcgattcgaaaaactgatc
gccagtcacgctgaggaaaccggcgagtcgatggataaaatcgctgcagctctggccttc
atcggccaacgtggcgaagaattcttctcaacggacaaacccaagcgtcagcgtcgcgag
cgtgatgatttcgatggccgcggcgaacgcgaaccacgggggcgtcgagaaagccgtcct
cctgaatcgggcatgactcgctaccgtatcgaagtcggtcgccgtgacggagtgaagcct
ggaaatattgtcggcgctgtcgccaacgaagccggaatcgaaggcaagtccatcggtccg
attcagatttactcggctcacacaacaatcgatctgccatcgggaatgcctgacgacgtt
cgcgatattttggaaaacactcgagttgtcggccgcgagcttcgtatccgcgaagcgact
cccaaggacgagattcaggaagatcgcggtcgtggtcgcggtggattctctggcggacgt
ggccgcaacgatcgacgtggcggtggaggaggacgcgattcgcgtggtggccgtgattct
cgcggcggcggtggtggacgcgatttccgtggaggaaagaaagactttcgcggcaagaag
aagcccggcggtcgaactttcgccaaagtaaaaagcaagcgtcaaagcgactaa
DBGET
integrated database retrieval system
