Mariniblastus fucicola: MFFC18_48610
Help
Entry
MFFC18_48610 CDS
T06181
Symbol
rhlE_2
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mff
Mariniblastus fucicola
Pathway
mff03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mff00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MFFC18_48610 (rhlE_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mff03019
]
MFFC18_48610 (rhlE_2)
Enzymes [BR:
mff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MFFC18_48610 (rhlE_2)
Messenger RNA biogenesis [BR:
mff03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MFFC18_48610 (rhlE_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Shikimate_DH
Flavi_DEAD
CMS1
ERCC3_RAD25_C
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QEG24938
UniProt:
A0A5B9PEV4
LinkDB
All DBs
Position
complement(6140922..6142196)
Genome browser
AA seq
424 aa
AA seq
DB search
MYAPLQKALRELNYETPTPIQSQTIPPAIEGADILGCAQTGTGKTASFALPILDYLGLEE
PNVISKRPNSLILAPTRELAIQISDSFNEYGKHMRFSQALVYGGVGQGKQVAALKRGVDV
LIATPGRLVDLMQQNHVSLDNVQIFVLDEADRMLDMGFLPDLRKIVAALPKQRQSLFFSA
TLPPKSRSLAKELLFNPVSINVTPESPSVERIDQKVMLLEKGKKFTQLDEILSGKSAKRS
IVFTRTKRGANQVAKKLDAAGIRAVAIHGNKSQNARERALDSFRRNKVTVLVATDVAARG
IDIDGVSHVINYDMPVEAESYVHRIGRTGRAGADGIAISFCTPTEKAELVAIEKLIEQSL
DCEEPFGPIRFEAAPKKGSGNSRSRHGNRGRRHSGGNTGGGGSSRASGKRGGQKSRRRKT
SSAR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcgccactgcaaaaagcacttcgcgaactcaactacgaaactcctactcccatt
cagtcacagaccattccgccagcgatcgaaggcgccgacattcttggttgtgcccaaaca
ggcacaggtaaaactgcttcttttgcgttgccaatcctcgactaccttgggcttgaagaa
ccgaatgtgatctccaagcgaccgaattcgttgatccttgctccgacgcgcgagttggcg
attcagatcagcgacagctttaacgagtatggcaaacacatgcggttcagccaggcactc
gtctatggcggggtagggcagggtaaacaggtcgctgcactgaaacgcggcgtggatgtt
ctcatcgcaacccccggtcgtctggtcgacttgatgcagcaaaaccatgtctcgcttgac
aacgtgcaaatttttgtgcttgatgaagcggatcgaatgttggacatgggctttctgcct
gatttgcgaaaaattgtggctgcgttacccaagcagcgacagtccctgttcttctcggca
acgctgccgcccaagtcgcgttcgctggctaaagagctgctgttcaatcctgtttcgatc
aatgtgactccagaatcgcccagcgttgagcggatcgatcagaaagtcatgctgttggaa
aaaggaaagaagttcactcagctggacgaaatcctttccgggaaatcggcaaaacggtcg
atcgttttcactcgaaccaaacgcggcgcaaaccaagtcgccaaaaagctggacgcagcc
ggaattcgagcggttgcgatccatggcaacaaatcgcagaacgctcgtgaacgagcactc
gattcatttcgccgcaacaaggttacggtgttggtcgcaacggatgttgcggctcgtgga
atcgacatcgatggagtgtcacacgtgatcaactatgacatgccagtggaagctgaaagc
tacgtgcatcgcattggtcgcaccggccgcgcgggtgcggatggcattgcgatttctttt
tgcacgccgaccgagaaggcggagctggttgcgatcgagaaattgatcgagcaaagtctg
gactgtgaggagccgtttggcccgattcgcttcgaggctgcaccgaaaaagggttccggc
aattcgcgatcacgtcacggaaaccgtggccgcagacactcaggcggcaacactggcggt
ggcggatcaagtcgcgcttcaggcaaacgtggaggtcagaaatcacgtcgccgcaagact
tcgtcggcgaggtag
DBGET
integrated database retrieval system
