Mycolicibacterium farcinogenes: K6L26_04605
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Entry
K6L26_04605 CDS
T07595
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mfg
Mycolicibacterium farcinogenes
Brite
KEGG Orthology (KO) [BR:
mfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfg03032
]
K6L26_04605 (topA)
03400 DNA repair and recombination proteins [BR:
mfg03400
]
K6L26_04605 (topA)
Enzymes [BR:
mfg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K6L26_04605 (topA)
DNA replication proteins [BR:
mfg03032
]
Prokaryotic type
DNA Topoisomerases
K6L26_04605 (topA)
DNA repair and recombination proteins [BR:
mfg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K6L26_04605 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QZH66967
LinkDB
All DBs
Position
995421..998243
Genome browser
AA seq
940 aa
AA seq
DB search
MAGDSGSGSKGNVRRLVIVESPTKARKIAGYLGSNYVVESSRGHIRDLPRNAADVPAKYK
SEPWARLGVNVDDNFEPLYIVSPDKKSTVTELKDLLKGVDELYLATDGDREGEAIAWHLL
ETLKPKVPVRRMVFHEITEPAIRAAAENPRDLDIALVDAQETRRILDRLYGYEVSPVLWK
KVAPKLSAGRVQSVATRIIVQRERERMAFRSAGYWDVSAELDASVSDPQATPPRFTAKLN
TVDGRRVAAGRDFDSLGQLKKPDEVLVLDEASAGALAAGLRGAQLAVSSVEQKPYTRRPY
APFMTSTLQQEAARKLRFSSERTMSIAQRLYENGYITYMRTDSTTLSDSAINAARNQARQ
LYGDEYVHPSPRQYTRKVKNAQEAHEAIRPAGDVFQTPGQLHAQLDTDEFRLYELIWQRT
VASQMADARGTTLSLRIAGTARGGEQVVFNASGRTITFPGFLKAYVESIDELAGGESDDA
ESRLPNLTQGQRVDAADLTADGHQTSPPARYTEASLIKALEELGIGRPSTYSSIIKTIQD
RGYVQKKGSALVPSWVAFAVVGLLEQHFGRLVDYDFTAAMEDELDEIANGQEQRTNWLSN
FYFGGEHGVEGSIARSGGLKHLVGGNLEGIDAREVNSIKLFDDDEGRAIVVRVGRNGPYL
ERMIADPDNPGELKPQRANLKDDLTPDELTLELAEKAFATPQEGRVLGVDPATGHEIVAK
DGRFGPYVTEILPEPPEDPDAGTTAKKGKKPTGPKPRTGSLLRSMDLETVTLDDALKLLS
LPRVVGVDPSNNEEITAQNGRYGPYLKRGTDSRSLATEEQMFTITLDEALKIYAEPKRRG
RQAAAAPPLRELGTDPASGKPMVIKDGRFGPYVTDGETNASLRKGDDVASITDERASELL
ADRRARGPVKKAAKKAPAKKAAKKAAAKKAPAKKAAAKKS
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
ttggctggcgatagcggcagcggtagcaaggggaatgtccggcgactcgtaattgtcgag
tcgccgaccaaggcgcgcaagatcgccggctacctgggctccaattacgtggtcgagtcc
tcccgcgggcatattcgtgatctgccccgtaatgccgccgacgtgcccgccaagtacaaa
tccgagccgtgggcgcggctcggggtcaatgtcgacgacaacttcgagccgctctacatc
gtcagccccgacaagaagagcacggtcaccgagctgaaggacctgctcaagggcgttgac
gagctctacctcgcgacggacggtgaccgcgagggtgaggcgatcgcctggcatctgctg
gagaccctgaagcccaaggtgccggtgcggcggatggtgttccacgagatcaccgaaccg
gccatccgcgctgccgcggaaaacccgcgtgacctggacatcgccctggtcgacgcgcag
gaaacccggcgcatcctcgaccgcctctacggctacgaagtgtcgccggtgctgtggaag
aaggtggcgccgaagctgtcggcgggccgcgtgcaatcggtggccacgcgcatcatcgtg
cagcgcgagcgggagcgcatggcgttccgcagcgccggctactgggacgtcagcgctgaa
ctcgacgcgtccgtgtcggacccgcaggccaccccgccgcggttcaccgccaagctcaac
accgtcgacggccgccgcgtcgccgccggccgtgatttcgactcgctggggcagctgaag
aagcccgacgaggtgctcgtcctcgacgaggccagcgccggagcgctggccgccgggctg
cgcggcgcccagctggccgtcagctccgtcgagcagaagccgtacacccgccgcccttac
gcgccgttcatgacgtcgacgctgcagcaggaagccgcccgcaagctgcggttctcctca
gagcgcaccatgagcatcgcgcagcggctgtacgagaacggctacatcacctacatgcgt
acggactcgacgacgctgtcggattcggccatcaacgccgcccgcaaccaggcacgtcag
ctctacggcgacgaatatgtgcatccgtccccgcgccagtacacccgcaaggtgaagaac
gcgcaggaggcgcacgaggccatccgacccgccggtgacgtgttccagaccccgggccag
ctgcacgcccagctcgacaccgacgagttccggctctacgagctgatctggcagcgcacc
gtcgcctcgcagatggccgacgcccgcggcaccacgctgtcgctgcgcatcgccggtacc
gcccgcggcggtgagcaggtcgtcttcaacgcgtcgggccgcaccatcacgttcccgggc
ttcctcaaggcttacgtcgagagcatcgacgagttggccggcggcgagtccgacgacgcc
gagagccgtctgccgaacctgacgcagggccagcgcgtcgacgccgccgatctgaccgcc
gacggccaccagaccagcccgccggcccgctacaccgaggcctcgctgatcaaggccctc
gaagagctcggtatcggccgcccgtcgacctacagctcgatcatcaagaccatccaggac
cgcggctacgtgcagaagaagggcagcgccctggtgccgtcctgggttgccttcgccgtg
gtgggcctgctggagcagcacttcggccggttggtggattacgacttcaccgccgccatg
gaggacgagctcgacgagatcgccaacggccaggagcagcgcaccaactggctgtcgaac
ttctacttcggcggtgagcacggcgtcgagggctcgatcgcccggtccggtggcctcaag
cacctcgtcggcggcaacctcgaaggcatcgacgcgcgagaagtcaactccatcaagctc
tttgacgatgacgagggtcgagccatcgtggttcgggtgggtcgtaacgggccgtacctg
gagcgcatgatcgccgatccggacaatccgggtgagctcaagccgcagcgggccaatctc
aaggacgatctgacccccgacgagctgacgctggaactggccgagaaggctttcgccaca
ccgcaagaggggcgggtgctgggtgtcgacccggcgaccggccacgaaatcgtggccaag
gacggacgtttcggtccctacgtcaccgagatcctcccggaacccccggaagatccggat
gcggggacgacggccaagaagggcaagaagccgaccggccccaagccgcgcaccggatcg
ctgttgcgctcaatggatctggagaccgtgacgctcgacgacgcgctcaagctgctgtcg
ttgccgcgcgtggtcggcgtcgacccgtcgaacaacgaggagatcaccgcgcagaacggc
cgctacggcccatacctcaagcgcggcaccgactctcgctcactggccaccgaagagcag
atgttcaccatcaccctcgacgaggcgctcaagatctacgccgagccgaaacgccgtggg
cgccaggccgctgctgccccgccgctgcgtgagctgggcaccgacccggcctcgggcaag
ccgatggtgatcaaggacggccgcttcggtccctacgtcaccgacggtgagaccaacgcc
agcctgcgcaagggcgatgacgtggcctcgatcaccgacgagcgggcttcggaactgctg
gctgaccgtcgcgcccgtggaccggtgaagaaggccgccaagaaggcgccggcgaagaag
gccgccaagaaagccgccgccaaaaaggccccggcgaagaaggccgctgccaagaagtcc
tga
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