Mycolicibacterium farcinogenes: K6L26_08205
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Entry
K6L26_08205 CDS
T07595
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mfg
Mycolicibacterium farcinogenes
Pathway
mfg00300
Lysine biosynthesis
mfg00470
D-Amino acid metabolism
mfg01100
Metabolic pathways
mfg01110
Biosynthesis of secondary metabolites
mfg01120
Microbial metabolism in diverse environments
mfg01230
Biosynthesis of amino acids
Module
mfg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mfg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
K6L26_08205 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K6L26_08205 (lysA)
Enzymes [BR:
mfg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
K6L26_08205 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QZH67607
LinkDB
All DBs
Position
complement(1740990..1742330)
Genome browser
AA seq
446 aa
AA seq
DB search
MTLLDILPSLRNTTRPRLDPNIWPLTTGVDGQGRITVGRVPLTDIADEYRTPAYVLDETD
FRTRAQRYRAVLGRTEVVYAGKSLLTTAVARWTAEEGLGLDVCSAAELATALAGGVDPAR
IVMHGNAKSCDELRDAIDIGVGRIVIDSPMEITYLAGLARRPQPVLIRVTPDIDIHGHRA
VTTGVTDQKFGFALGDHRAARAAARILATPNLDLVGLHCHLGSQITDPAPYGVAVRRLIG
AMADIRAEHGLVLTELNIGGGHGVPYVRGDAALDIGALAAVVDDELTAACAAERFPRPRL
VVEPGRAISARAGVTLYRVCGVKSQPGGRTFVAVDGGMSDNPRVALYGAKYTVALANRHP
LGSTMVATVVGRHCEAGDEIVHDVELPADVHAGDLLAVACTGAYQHSMASTYNMVGRPPV
VAVRDGATRVLVRRETTADLLSRDLG
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgctggacatcctgccctctctgcgcaacaccacccggccacggctcgacccg
aacatctggccactcaccacgggcgtcgacgggcagggccgcatcaccgtcggccgagtg
ccgctcaccgacatcgccgacgagtaccgcactcccgcctatgtgctggacgagaccgat
ttccggacccgcgcccagcgctaccgggctgtcctcggccggaccgaggtggtctacgcg
ggcaagtcgctgttgaccaccgccgtcgcccgctggactgccgaagaagggctcggcctg
gacgtctgctcagcggccgagttggcgaccgcgttggccggcggggtcgaccccgcgcgc
atcgtgatgcacggcaacgccaaatcgtgcgacgagctgcgcgatgcgatcgatatcggg
gtgggccgcatagtgatcgactccccgatggagatcacctacctggccgggctggcgcgc
cggccccagccggtgctgatccgggtcaccccagacatcgacatccacggtcaccgtgcg
gtcaccacgggggtgacggaccagaagttcggtttcgcgctgggcgatcaccgggctgcg
cgggccgcggcccgcattctggccaccccgaacctcgacctggtcgggctgcactgccac
ctcggctcccagatcaccgatcccgcgccgtacggagtggccgtgcggcggttgatcggc
gcgatggccgacatccgcgccgaacacggcctggtgctgaccgagctcaatatcggtggc
ggacacggcgttccgtatgtccgcggagacgccgccctggacatcggtgcgctcgccgcc
gtcgtcgacgacgagctgaccgccgcgtgcgccgccgaacggttcccgcggccgcgcctg
gtcgtcgaacccggccgcgccatcagcgcgcgagccggggtgacgctgtatcgggtgtgc
ggggtgaagtcccagcccggcgggcgcaccttcgtcgccgtcgacggcggcatgagcgac
aacccgcgggtagctctgtacggcgcgaaatacacggtggcactggcgaatcgacacccg
ttggggtcgaccatggtggccaccgtggtgggacgacactgcgaggccggagacgagatc
gtccacgacgtcgaactgcccgccgatgtccatgccggcgatctgctggctgtggcctgc
accggggcctaccagcacagcatggcctcgacctacaacatggtgggccgcccgccggtg
gtggcggtgcgtgacggtgcgacgcgagtgctggtgcgtcgggagacgacagcggacctg
ctgtcgcgggatctgggctga
Mycolicibacterium farcinogenes: K6L26_10360
Help
Entry
K6L26_10360 CDS
T07595
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mfg
Mycolicibacterium farcinogenes
Pathway
mfg00300
Lysine biosynthesis
mfg00470
D-Amino acid metabolism
mfg01100
Metabolic pathways
mfg01110
Biosynthesis of secondary metabolites
mfg01120
Microbial metabolism in diverse environments
mfg01230
Biosynthesis of amino acids
Module
mfg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mfg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
K6L26_10360 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K6L26_10360 (lysA)
Enzymes [BR:
mfg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
K6L26_10360 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QZH67988
LinkDB
All DBs
Position
2184661..2186085
Genome browser
AA seq
474 aa
AA seq
DB search
MNAHPAGPRHADEVHHAGAPEKPQSPEEVMLLAPNVWPRNLVRGDDGVVSIAGVPVTELA
AEYGTPLFVIDEDDFRSRCRDIAAAFGGGEYVHYAAKAFLCSEVARWVNQEGLSLDVATG
GELAVALHADFPPERITLHGNNKSVAELATAVKVGVGHVVVDSLIEIERLNEVAGAAGIV
QDVLVRVTPGVEAHTHEFISTAHEDQKFGLSLASGAAMDAVRKVFATDNLRLVGLHCHVG
SQIFDVAGFEVAAHRVIGLLRDVVSEFGVEKTAQMSIIDLGGGLGISYVPQDDPPPMQEL
ADKLKAIVRSESEAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVAVSATAQRRYVSV
DGGMSDNIRPALYGAEYDARLVSRFSDASAALARIVGKHCETGDIIVRDTWVSDDIAPGD
LLAVAATGAYCYSMSSRYNLLCRPAVVAVKDGKTRLVLRRETVDDLLSLEVSGQ
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcgcaccccgccgggccccggcacgccgacgaggtgcaccacgccggtgctccc
gagaagccgcagagccccgaagaagtgatgctgctggccccgaacgtgtggccacgcaac
ctggttcgcggcgacgacggtgtggtgtccatcgccggagtgccggtcaccgagttggcg
gccgagtacggcaccccgctgttcgtgatcgacgaggacgacttccgctcccgttgccgc
gacatcgccgcggccttcggcggcggtgagtacgtgcactacgccgccaaggcctttctg
tgcagtgaggtcgcgcggtgggtcaaccaggaaggcctgtcgctcgacgtggcgaccggg
ggagagctggccgtcgcgctgcacgccgacttcccgccggaacgaatcaccctgcacggc
aacaacaaatccgttgccgaactggccaccgcggtcaaagtcggagtcggacatgtggtg
gtcgactcgctgatcgagatcgagcgtctgaatgaggtcgccggagccgcgggcatcgtc
caggacgtgctcgtgcgggtaaccccgggtgtggaggcacacacccacgagttcatctcc
accgcccacgaggaccagaagttcggcctgtcgctggccagtggcgcggccatggacgcg
gtgcgcaaggtcttcgccaccgacaacctgcgcctggtcggactgcactgccacgtcggc
agccagatcttcgacgtggccggcttcgaagtggccgcccaccgggtgatcggcctgctt
cgtgacgtggtgtcggaattcggtgtggagaagaccgcccagatgtcgatcatcgacctc
ggtggcggtctcggtatttcctatgtgccgcaagatgacccgccgccgatgcaggagctc
gcggacaagctcaaagccatcgtgcgcagcgagtccgaggccgtggggttgccgacgccg
aagctcgtggtcgagccggggcgcgccatcgccgggccgggcaccatcaccctctacgag
gtgggcaccgtcaaagacgtggcggtcagcgccaccgcgcagcgccgctacgtcagcgtc
gacggcggcatgagtgacaacatccgccccgccctgtacggcgccgagtacgacgcgcgt
ctggtgtcgcgattcagcgacgcctccgcggcgctggcccgtatcgtcgggaaacactgc
gagaccggtgacatcatcgtccgtgacacctgggtctccgatgacatcgcgcccggtgac
ctgctggcagtcgccgcgaccggtgcctactgctactcgatgtcgagccggtacaacctg
ctgtgccgccccgccgtggtcgccgtgaaagacggcaagacgcggttggtgctccgtcgg
gaaaccgtcgacgatcttttgagcctggaggtgagtggtcaatga
DBGET
integrated database retrieval system