Mycolicibacterium farcinogenes: K6L26_09880
Help
Entry
K6L26_09880 CDS
T07595
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mfg
Mycolicibacterium farcinogenes
Pathway
mfg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6L26_09880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfg03019
]
K6L26_09880
03009 Ribosome biogenesis [BR:
mfg03009
]
K6L26_09880
Enzymes [BR:
mfg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K6L26_09880
Messenger RNA biogenesis [BR:
mfg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K6L26_09880
Ribosome biogenesis [BR:
mfg03009
]
Prokaryotic type
rRNA helicases
K6L26_09880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
CMS1
P-loop_SecA
HEM4
Flavi_DEAD
adh_short
Surface-like_ins_dom
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QZH67904
LinkDB
All DBs
Position
2092192..2093964
Genome browser
AA seq
590 aa
AA seq
DB search
MTSPDPDSGETAPTFADLQIHPAVLKAVTDVGYESPSAIQAATIPAMLAGSDVVGLAQTG
TGKTAAFAIPILSKIDTSSRKTQALVLAPTRELALQVAEAFGRYGAHLPEINVLPIYGGA
SYTVQLSGLRRGAQVVVGTPGRVIDHLERGTLDLSNLDYLVLDEADEMLTMGFAEEVERI
LADTPEYKQVALFSATMPPAIRKITSKYLHDPVEVTVKAKTATAENITQRFIQVAGARKL
DALTRVLEVEEGDAMIVFVRTKQATEEVAERLKSRGFAAAAINGDINQAQRERTITALKD
GTIDILIATDVAARGLDVERISHVVNYDIPHDTESYVHRIGRTGRAGRSGHALLFVTPRE
RHLLKAIEKHTRSKVIEAELPSVDDVNAQRVAKFRDSITDSLNADGLELFRRLIEDYERE
NDVPMADIAAALALQSRNGEEFLMTEPPPEKRRERDDRGERPPRKERPPREGLATYRISV
GKRHKVGPGHIVGAIANEGGLHRNEFGHITIRGDYSLVELPEKLSGKTLKALENTRISGM
LINLTPDRGERDDRGPRREYKGRSENKGRSESKDRSGYRDRSGKPHRKTK
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgccagacccggattcgggggagaccgccccaacgtttgccgacctgcagatt
caccctgcggtgctgaaggcagtcactgatgtcggctatgagtcgccgtcggcgatccaa
gccgcgaccatcccggccatgctggcgggctccgacgtggtcgggctggcccagaccggc
accggcaagactgcggctttcgccattccgatcctgtccaagatcgacacctccagccgc
aagacccaggccttggtgctggcgcccacccgtgagctggcgttgcaggtcgccgaggcc
ttcggccgctacggcgcgcacctgcccgagatcaacgtgctgccgatctacggcggcgcc
tcctacacggtgcagttgtcgggtctgcggcgcggtgcgcaggtggtggtgggcactccc
ggccgtgtgatcgatcacctcgagcgcggcacgctggacctgtcgaacctggactacctg
gtgctcgacgaggccgacgagatgctcaccatgggcttcgccgaagaggtggagcggatc
ctcgccgacaccccggagtacaagcaggtggcgttgttctctgccaccatgccgccggcc
atccgcaagatcacctcgaagtacctgcacgatccggtggaggtgacggtcaaggccaag
acggccaccgctgagaacatcacccagcggttcatccaggtggccggtgcccgcaagttg
gatgcgctgacgcgggtgctcgaggtcgaggagggcgacgcgatgatcgtgttcgtccgc
accaagcaggccaccgaggaggtcgccgagcggctcaagtcccgtggtttcgcggccgcc
gcgatcaacggtgacatcaatcaggctcagcgcgagcgcaccatcaccgcgctcaaggac
ggcacgatcgacatcctgatcgccaccgacgtcgcggcccgcggcctcgacgtcgagcgc
atcagccatgtcgtcaactacgacatcccgcacgacaccgagtcctacgtgcaccgcatc
ggccgcaccggccgggccggccgctccgggcatgcgctgttgttcgtcaccccgcgcgaa
cgccacctgctcaaggccatcgagaagcacacccgctccaaggtcatcgaggccgagctg
ccgagcgtcgacgatgtcaatgcgcaacgcgtggccaagttccgtgactcgatcaccgat
tcgctcaacgccgacggactggagttgttccgcaggctgatcgaggactacgagcgcgag
aacgacgtcccgatggccgatatcgccgcggcgctcgcactgcagtcgcgtaacggcgaa
gagttcctgatgaccgagccgccaccggagaagcgccgggagcgtgacgaccggggcgag
cggccgccgcgcaaggagcgccctccgcgcgaaggcctggcgacgtaccggatctcggtg
ggcaagcggcacaaggtggggcccggccacatcgtcggcgccatcgccaacgagggcggt
ctgcaccgcaacgagttcggccacatcaccattcgcggggactactcgttggttgagctg
cccgagaagctgtccggcaagacactcaaggcgttggagaacacccggatctcggggatg
ctgatcaatctgacgcccgatcgtggcgagcgtgacgatcgcggaccgcgtcgtgagtac
aagggtcgttccgagaacaagggccgttccgagagcaaggaccgttcgggttaccgcgac
cgctcggggaagccgcaccggaagaccaagtga
DBGET
integrated database retrieval system
