Mycolicibacterium farcinogenes: K6L26_12100
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Entry
K6L26_12100 CDS
T07595
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mfg
Mycolicibacterium farcinogenes
Pathway
mfg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6L26_12100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfg03019
]
K6L26_12100
03009 Ribosome biogenesis [BR:
mfg03009
]
K6L26_12100
Enzymes [BR:
mfg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
K6L26_12100
Messenger RNA biogenesis [BR:
mfg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K6L26_12100
Ribosome biogenesis [BR:
mfg03009
]
Prokaryotic type
rRNA processing factors
K6L26_12100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
QZH68295
LinkDB
All DBs
Position
2549494..2552499
Genome browser
AA seq
1001 aa
AA seq
DB search
MAEDAQNDDLSTQTPQQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTIDK
VDAERVREALAADSAEATPAEPVEAAQAEPVQVEAVTVTESVVAVAEESAGGVQQAEPEP
VLVGDEPESRLILETANIPTAREAHTERADYLPLFVAPQPVSFVQVHVDEDDDEDDDDTT
DTDSDGDDEQADRPAARRRRRGRRGRGRGRGEQSDDNAAESGPDSDGDNLDDQGESDQDS
DESDESDEGNDEDTTGGDGTNRRRRRRRRRKSGSGDSDDAGSPDDPPNTVVHERAPRAER
SGKSSDDSEIQGISGSTRLEAKRQRRRDGRDAGRRRPPILSEAEFLARREAVERTMIVRD
KVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLGIVQNVLPSMEAAFVDI
GRGRNGVLYAGEVNWEAAGLGGSNRKIEQALKPGDYVVVQVSKDPVGHKGARLTTQVSLA
GRYLVYVPGASSTGISRKLPDTERQRLKEILKEVVPSDAGVIIRTASEGVKEEDIRSDVE
RLQQRWTEIEAKAAEVTGKKAGAAVALYEEPDVLVKVIRDLFNEDFSGLIVSGDEAWDTI
NSYVNTVAPDLVGRLTKYEPAGGADAPDVFAVHRIDEQLAKAMDRKVWLPSGGTLVIDRT
EAMTVVDVNTGKFTGAGGNLEQTVTRNNLEAAEEIVRQLRLRDIGGIVVIDFIDMVLESN
RDLVLRRLTEALGRDRTRHQVSEVTSLGLVQLTRKRLGTGLVEAFSTSCTHCGGRGIVLH
GDPVDTASSSNAGRKSEPSGGGGRRSKRGKRGNARPEPEEVPVVKVPDHPAGEHPMFKAM
AAANGRHHDDESVDEDTTDATADADEQDTAELVGVADGSTDGEFDAQDADEVDEADEADD
VADEDDDEDEIDLDDEDLDDDDDDELDDIDDDSEDDDSDEDDSDEFDDSEDDEDGEDGED
SDESEEDVYQAPEPVVVEAPPSRGRTRRRAAARPAGPPSHE
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaagatgcccagaatgacgacctatcaacccagactccgcaacaggagggactg
cccgagcgcctgagagtccactcgctggcgcgggtactcggcaccaccagcaggcgcgtg
ctcgatgctctggcggaattcgacgggcgtcagcgcagtgcgcattccacgatcgacaag
gtcgacgccgagcgggtccgtgaggcactggccgccgattcggccgaagcaacgcctgcc
gagccagtagaagctgcgcaggcagagccggtgcaggtggaggccgtcaccgtgaccgag
tctgtggtcgccgtggccgaggagtcggccggtggcgtgcagcaggccgagcccgagccc
gtgctggtcggcgacgagcccgagtcccggttgatcctggagacggcgaacatccccacg
gcgcgggaggcgcacactgagcgggccgattacctgccgttgttcgtggcgccgcagccg
gtcagcttcgtgcaagtacacgtcgacgaggacgacgacgaagacgacgacgacaccact
gacaccgactccgacggcgacgacgagcaggcggatcgtcccgccgcacgccggcgtcgg
cgtggtcgccgtgggcgcggtcgtggacgcggagagcagtccgacgacaacgcagccgaa
tcgggcccggattccgatggcgacaacctcgacgaccagggcgaatccgatcaggattcc
gatgagtccgacgagtcggacgaaggcaacgacgaggacaccacgggcggcgacggcacc
aaccggcgtcggcggcgtcgccgtcggcgcaagtccggctcgggtgacagcgatgacgcg
ggctcgccggatgacccgcccaacaccgtcgtgcacgagcgcgcgccgcgcgccgagcgg
tcgggcaagagcagcgacgattccgagatccaggggatcagcgggtcgactcggctggag
gccaagcgtcagcgccgccgcgatggacgcgacgcgggtcgccgtcgccccccgatcctg
agcgaggcagagttcctggcccggcgcgaggccgtcgaacgcaccatgatcgtgcgcgac
aaggtgcgcaccgaaccgccgcatgagggcgcccgctacacccagatcgctgtgctggaa
gacggcgtcgtcgtcgagcacttcgtcacgtcagcggcgtcggcgtctctggtgggcaat
atctatctgggcatcgtgcagaacgtgctgccctccatggaggccgcattcgtcgacatc
ggccggggccgcaacggtgtgctctacgccggtgaggtgaactgggaggccgccgggctc
ggcgggtcgaaccgcaagatcgagcaggctctcaagccgggcgattacgtggtggtccag
gtcagcaaggatcccgtcgggcacaagggcgcccgcctcaccacgcaggtgtcactggcc
ggccgctacctggtttacgtgccgggggcgtcgtcgaccgggatcagccggaagctgccc
gacaccgaacgccagcggctcaaggagattctcaaagaggtcgtcccgtccgacgccggc
gtgatcatccgcacggcttccgaaggcgtgaaggaagaggacatccgctccgatgtcgag
cggctgcagcagcgctggaccgagatcgaggccaaggccgccgaggtcaccgggaagaag
gccggcgccgccgtcgcgctctacgaagagcccgatgtcctggtcaaggtcatccgcgac
ctgttcaacgaggacttctcgggtctgatcgtctccggcgacgaggcctgggacacgatc
aactcctacgtcaacaccgtcgcccccgatctggtcgggcggctgaccaagtacgagccg
gccggcggcgcagatgcgcccgacgtcttcgccgtgcaccgcatcgacgagcagttggcc
aaggcgatggaccgcaaggtgtggctgccgtcgggcggcacgctggtcatcgaccgcacc
gaggcgatgaccgtcgtcgacgtcaacaccggcaagttcaccggtgccggcggcaacctc
gagcagaccgtcacccggaacaacctggaagcggccgaggagatcgtgcggcagctgcgg
ttgcgcgacatcggcggcatcgtggtcatcgacttcatcgacatggttctggaatcgaac
cgggatctggtgctgcgccgactcaccgaggcgctcggccgggaccgtacccgtcaccag
gtgtcggaagtgacgtcgctggggctggtgcagctgacccgaaagcggttgggcaccggt
ctggtggaggcgttctcgacgtcgtgcacgcattgcggcggccgcggcatcgtgttgcac
ggtgatccggtcgacaccgcctcgtcgtcgaacgcgggccgcaagtctgagcccagcggc
ggcggcgggcggcgcagcaagcggggcaagcggggcaatgcccgtcccgagcccgaagag
gtgccggtcgtcaaggtgcccgaccatccggccggcgaacacccgatgttcaaggcgatg
gccgcggccaacggccgtcaccacgacgacgagtcggtcgacgaggacaccaccgacgcg
actgccgacgccgacgagcaggacaccgccgagctggtgggcgtggccgacggatccacc
gacggcgagttcgacgcgcaggacgccgacgaggtcgatgaggccgatgaggccgacgac
gtagcagacgaggacgacgacgaggacgagatcgacctcgacgacgaagacctcgatgac
gacgacgatgacgagctggacgacatcgacgacgattccgaggatgacgattccgacgag
gatgactcagacgagttcgacgattccgaggatgacgaggacggcgaggacggcgaggac
tcagacgagtccgaggaggacgtctatcaggccccggagcccgtggtcgtcgaggcgccg
ccgagccgtggccgtacccgtcgacgcgcggcggcaaggccggcggggccgcccagccac
gagtag
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