Mycolicibacterium farcinogenes: K6L26_20700
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Entry
K6L26_20700 CDS
T07595
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mfg
Mycolicibacterium farcinogenes
Pathway
mfg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mfg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K6L26_20700 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfg03400
]
K6L26_20700 (mutM)
Enzymes [BR:
mfg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
K6L26_20700 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K6L26_20700 (mutM)
DNA repair and recombination proteins [BR:
mfg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K6L26_20700 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
TackOD1
Auto_anti-p27
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QZH64447
LinkDB
All DBs
Position
complement(4352866..4353729)
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AA seq
287 aa
AA seq
DB search
MPELPEVEVVRRGLQEHVAGKSISAVRVHHPRAVRRHEAGPADLTARLLGARITGTGRRG
KYLWLTLGEDEGDETDALVVHLGMSGQMLLGPIRDDRHLRIAALLDDGTALSFVDQRTFG
GWQLAELVTVDGTAVPQPVAHVARDPLDPLFDREHVVNVLRRKHSEIKRQLLDQTVVSGI
GNIYADEALWRTKINGARTAALLPRRRLAELLDAAAEVMTDALSQGGTSFDSLYVNVNGE
SGYFERSLDAYGREGQPCRRCGAVMRRDKFMNRSSFYCPKCQPRPRG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgccagagctgcccgaggtagaggtagtccgccgcggcttgcaggaacatgttgcgggc
aaatcgatttcggcggtacgggtgcatcatccccgtgccgtacgccgtcatgaggccggc
cccgctgacctgactgcccggttgctcggcgcccgcatcaccggaaccggtcgccgcggc
aaatacctgtggttgacgctgggggaggacgagggcgacgagaccgacgccttggtggtg
cacctggggatgagcggtcagatgctgctgggtccgatccgcgacgatcggcaccttcgg
atcgcggcgctgctcgacgacggtacggccttgagcttcgtcgaccaacgtacgttcgga
ggctggcagctggccgagttggtgacggtcgacggcaccgcggtgccgcaaccggtggcg
cacgtcgcccgcgatccgctcgacccgctgttcgaccgcgaacacgtggtcaacgtgttg
cggcgtaagcactctgagatcaaacgccagctactcgatcagaccgtggtgtccggtatc
ggcaacatctacgccgatgaggcgctgtggcggaccaagatcaacggcgccagaaccgct
gcactgctaccacgccgccggctggccgagttgctcgacgccgcagcagaggtgatgacc
gatgcgctgagccagggcgggacgtcgttcgattcgctgtacgtcaacgtcaacggtgaa
tccggttacttcgaacgctctttggatgcctacggtcgcgaaggtcagccgtgccgacgg
tgcggtgcggtgatgcgccgcgacaagttcatgaaccggtcgtcgttctactgcccgaaa
tgtcagccccgtccccggggctga
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