KEGG   Mycolicibacterium farcinogenes: K6L26_23675
Entry
K6L26_23675       CDS       T07595                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mfg  Mycolicibacterium farcinogenes
Brite
KEGG Orthology (KO) [BR:mfg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mfg03400]
    K6L26_23675
Enzymes [BR:mfg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     K6L26_23675
    5.6.2.6  RNA 3'-5' helicase
     K6L26_23675
DNA repair and recombination proteins [BR:mfg03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    K6L26_23675
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH3_Lhr WH4_Lhr DEAD WH2_Lhr Helicase_C ResIII PhoH DUF6406 AAA_22 GST_C_2
Other DBs
NCBI-ProteinID: QZH64975
LinkDB
Position
4966664..4971178
AA seq 1504 aa
MATTPVDSLARFSALTREWFNAAFPAPTAAQAQAWDAIAEGHNTLVIAPTGSGKTLAAFL
WAIDELARSAEPRSGTTVLYVSPLKALAVDVERNLRTPLTGITRVAERHGVPAPSISVGV
RSGDTTPSQRRAMLSKPPDILITTPESLFLMLTSAARETLASVRTVIVDEVHAVAATKRG
AHLALSLERLDQLLDKPAQRIGLSATVRPPEEVARFLSGQAPTTIVAPPAAKTFDLSVQV
PVPDMANLDNNSIWPDVEERIVDLIEAHQSSIVFANSRRLAERLTSRLNEIHAERAGIEL
TLDHNPQVGGGAPAQLMASGQANGAPTLLARAHHGSVSKEQRAQVEDDLKSGRLRAVVAT
SSLELGIDMGAVDLVIQVESPPSVASGLQRIGRAGHQVGEISQGVLFPKHRTDLIGCAVT
VQRMRTGDIETMHVPANPLDVLAQHTVAVAALEPVDADAWFDAVRRSAPFATLPRSAFEA
TLDLLSGKYPSTEFAELRPRLVYDRDHGTLTGRPGAQRLAVTSGGAIPDRGLFTVYLATD
SEKPSRVGELDEEMVYESRPGDVISLGATSWRITEITHDRVLVIPAPGQPARLPFWRGDS
VGRPAELGAAVGAFTGELAALGRTEFDERCQSMGFAGFATDNLYQLLRDQREATGVVPSD
STFVVERFRDELGDWRVILHSPYGLRVHGPLALAVGRRLRERYGIDEKPTASDDGIIVRL
PDSGETPPGADLFVFDADEVEPVVTAEVGGSALFASRFRECAARALLLPRRHPGKRSPLW
HQRQRAAQLLDIARKYPDFPIVLETVRECLQDVYDVPALTELMRRVAQRRLRVVEVETAT
PSPFAASLLFGYVGAFMYEGDSPLAERRAAALALDTVLLSELLGRVELRELLDPAVVAST
SAQLQHLTEERAARDAEAVADLLRMLGPLTEAEIAARATTDAVGGWLDGLHAAKRALPVT
YAGQTWWAAVEDIGLLRDGVGAPVPVGVPAAFTESVDDPLGDLIGRYARTHGPFTTTEVA
ARFGLGLRVTADVLGRMAVDGRLVRGEFVDDLPGDQWCDAEVLRILRRRSLAALRAQVEP
VSTAAYGRFLPSWQHVGSAHSTGIDGLAAVIEQLAGVPLPASAVESLVFGQRVRDYQPAM
LDELLASGEVMWSGAGQIGGSDGWVAFHLADTAPLTLPAPTEIEFTDTHRAIMETLGHGG
AYFFRQLAADGTESELKAALWELIWAGWVTGDTFAPVRAMLSGPRRSGTPAHRQRQRPPR
LSRYSVARPHSRAADPMVSGRWSALPAAEPVSTVRAHFQAELLLNRHGVLTKGAAAAEGV
PGGFATLYKVLSAFEDAGRCQRGYFVESLGGAQFAAASTVDRLRSYLDGVDPQRPEYHAV
VLAATDPANPYGAALAWPERGGDDTHRPGRKAGALVALVDGQLVWFLERGGRTLLSFTSD
AETQRAAAAALADLVSSGRMPSLLVERINGVAVLDPGVDAERAAVQDALTGAGFSRTPRG
LRLR
NT seq 4515 nt   +upstreamnt  +downstreamnt
gtggccaccacgccggtcgattcgctggcccggttcagtgccctgacccgggagtggttc
aacgctgccttccccgcccccacggctgcccaggcgcaggcttgggacgcgatcgctgaa
gggcacaacaccctggtcatcgccccaaccgggtccggcaagaccctggccgcgttcctg
tgggccatcgatgagctggcacgatcggccgaaccgcgctcgggcacgacggtgctctac
gtgtccccgctcaaagcgctggccgtcgacgtggagcgcaacctgcgcaccccgctgacc
gggatcacccgcgttgccgagcggcacggggtgccggccccttcgatcagcgtcggcgtc
cggtccggggataccacgcccagccagcggcgggcgatgctgagcaagccgcccgacatc
ctgatcaccacgcccgagtcgctgtttttgatgctcacctcggccgctcgcgagacgctg
gcatccgtgcggaccgtgatcgtcgacgaggtacacgccgtcgccgccaccaaacgcggt
gcgcacctggccctctcactcgaacgcctcgatcagctgctcgacaaaccggcccagcgc
atcgggttgtcggcgacggtgcgccctcccgaggaggtggcccggttcctgtccgggcag
gcacccaccaccatcgtcgccccgcctgccgccaagacgttcgacctctccgtccaagtc
ccggtaccggacatggccaacctcgacaacaacagcatctggcccgacgtcgaggaacgc
atcgtggacctgatcgaggcgcatcagtcctcgatcgtgttcgccaattcccggcggctg
gccgagcggctgacctcgcggctcaacgagatccacgccgaacgcgccggaatcgagctc
accctcgaccacaacccccaagtgggtggcggcgccccggcccaactcatggccagcggc
caagccaacggtgcgccgacgctactggcccgcgcccaccacggctcggtcagcaaggag
cagcgggcacaggtcgaagacgacctcaagagcggccgactgcgcgccgtcgtcgccacc
tccagcttggagctgggcatcgacatgggtgcggtcgacctggtgatccaggtcgagtcg
ccgccgtcggtggccagtgggctgcaacgcatcgggcgggccgggcatcaagtcggcgag
atctcccagggtgtgctgttccccaaacatcgcaccgacctgatcggttgcgcggtcacg
gtgcagcgcatgcgcaccggcgacatcgagaccatgcacgttccggccaatccgctcgac
gtgctggcccagcacacggtggcggtcgcggcgctggagcccgtcgatgccgacgcgtgg
ttcgacgccgtccggcgcagcgccccgttcgccacgttgccgcgcagtgccttcgaagcg
accctcgacctgttgtccgggaagtatccgtccaccgaattcgccgagctgcggccacgg
ctggtgtatgaccgcgaccacggcacgctcaccggccgcccaggtgcccagcgcctggcc
gtcacgtccggtggcgccatccccgaccgggggctgttcaccgtttacctggccaccgat
tccgaaaagccctcgcgggtaggcgaactcgacgaggagatggtgtatgagtcacgcccc
ggcgacgtcatctccctgggcgccaccagctggcggatcactgagatcacccatgaccgc
gtactggtcatcccggcaccgggtcagcccgccaggctgccgttctggcgtggcgacagc
gtaggccggcccgccgagctgggtgcggcggtcggcgcgttcaccggtgaactcgcggcg
ctcggccgcaccgaattcgacgagcgctgccagtcgatgggtttcgccggcttcgccacc
gacaacctctatcagctgttgcgcgatcagcgggaagccaccggcgtggttcccagcgac
agcaccttcgtggtcgagcgtttccgggacgagctgggcgactggcgagtgatcctgcac
tccccgtacggcttgcgggtccacggcccgctggccctggcggtggggcgacggctgcgc
gagcgctacggcatcgacgagaagcccaccgcctccgacgacggcatcatcgtgcgactc
cccgacagcggcgaaacaccgccgggtgcggatcttttcgtgttcgacgccgacgaggtg
gaacccgtcgtcaccgccgaagtgggtggctcggcgttgttcgcctcccggttccgggaa
tgcgccgcccgagccttgctactgccgcgcaggcacccgggcaagcgttccccgttgtgg
catcaacggcaacgcgccgcgcaactgctcgacatcgcccgcaagtatccggacttcccg
atcgtgctggaaacggtgcgcgaatgcctgcaggacgtatacgacgtacccgcgctcacc
gagctgatgcggcgcgtggcgcagcgccggttgcgcgtggtcgaggtcgaaaccgccacc
ccctcaccgttcgcggcctcactgctgttcggctacgtcggcgccttcatgtacgagggc
gacagcccgctggccgagcggcgcgccgccgcactcgcgctggacaccgtgctgctgtcc
gaactgctcggccgggtggagctgcgcgaactactggaccctgcggtcgtcgcctcgacg
tcagcccagctgcagcacctcaccgaggagcgcgcggcacgtgacgccgaagccgtggcc
gatctactgcggatgctgggcccgctgaccgaggccgagatcgccgcccgcgccaccacc
gatgcggtcggcggctggctcgacgggctgcacgccgccaaacgggcgctaccggtgacc
tacgcgggccagacctggtgggcggcagtggaagacatcggcttgctgcgcgacggggtc
ggggcgccggtgcccgtcggcgtaccggcggcgttcaccgagtccgtcgacgatccgctc
ggggacctgatcggccgctacgcccgcacccacgggccgttcaccaccaccgaggtcgcc
gcccggttcggcctgggcctgcgggtgaccgcagatgtcttggggcgcatggccgtcgac
ggccggctggtgcgcggcgagttcgttgacgacctgccaggcgatcagtggtgcgacgcc
gaggtgctgcggatcctgcggcgtcgttccctggcggcactgcgggcacaggtcgaaccc
gtcagcaccgcggcctatggccggttcctgccgtcctggcagcacgtcggctcggcccac
agcacgggaatcgacgggctggccgccgtgatcgagcagctggccggggtcccgctcccc
gcatcggcggtcgagtccctggtcttcgggcagcgagttcgcgactatcagccggccatg
ctcgatgagctcctggcctcgggcgaggtcatgtggtcgggcgccgggcagatcggcggc
agcgacgggtgggtcgcgttccatctggccgacaccgcaccgctgacgctgcccgcgccc
accgagatcgagttcaccgacacccaccgggcgatcatggagacgctcggccacggcggc
gcgtacttcttccgccagctcgccgccgacggtaccgagtccgagttgaaagccgctctg
tgggaacttatctgggccggttgggtcaccggggacaccttcgccccggtgcgggcgatg
ttgtcgggtccgcggcggtccgggacacccgcgcaccggcagcgtcaacgcccaccgcgg
ctgagccgttacagcgtggcacgcccccacagccgcgcggccgatccgatggtgtccggt
cgctggtcggcattgcctgccgcagaaccggtttcgaccgtacgcgcccatttccaggcc
gagctgctgctcaaccggcacggggtgctgaccaaaggggcggccgcggccgagggtgtg
ccgggcgggttcgccacgttgtacaaggtgttgagcgcattcgaggatgccggccgctgc
caacggggctacttcgtggaatcgctcggcggcgcacaattcgcggccgcgtcgaccgtg
gaccggttgcgctcgtatctcgacggcgtcgaccctcagcggcccgaatatcacgcggtc
gttctcgcggcgaccgatccggccaacccctacggagcggccctggcttggcccgaacgc
ggcggtgacgacactcaccgcccgggccgcaaagccggagcactggtcgcgctggtcgat
gggcagttggtgtggttcctggaacgcggcggccggaccctgctgagcttcacctccgat
gccgaaacccaacgcgccgccgcagccgccctggccgatctggtcagttcgggccgcatg
ccctcgctactggtcgagcggatcaacggggtcgccgtcctcgaccccggggtcgatgcg
gaacgtgccgcggtgcaagacgcgctgaccggcgccgggttctcccgcaccccgcgcggt
ctacggcttcggtaa

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