Mycolicibacterium farcinogenes: K6L26_24985
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Entry
K6L26_24985 CDS
T07595
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mfg
Mycolicibacterium farcinogenes
Brite
KEGG Orthology (KO) [BR:
mfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfg03016
]
K6L26_24985 (truA)
Enzymes [BR:
mfg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
K6L26_24985 (truA)
Transfer RNA biogenesis [BR:
mfg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K6L26_24985 (truA)
Prokaryotic type
K6L26_24985 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QZH69266
LinkDB
All DBs
Position
complement(5236578..5237450)
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AA seq
290 aa
AA seq
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MPAIDSGGGHVALVRLRLDIAYDGTDFAGWAVQAGQRTVAGVIDEALSTVFRTPVVTRTA
GRTDTGVHATGQVAHVDVPVDAVAHAYPRTTRPGDAEFTPLVRRLARLLPTDVRIRDIVR
APAGFDARFSALRRHYTYRLSLAPYGVEPAEARFVTPWSKPLDLDAMTVASRELVGLNDF
AAFCRHRPGATTIRDLQRLEWVRDGHYVTAHVTADAFCWNMVRSLVGALLAVGEGRRPVS
WTAGLLSETSRSSDFAAAPARGLTLVQVDYPADDQLEARNLITRDVRTAD
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccatcgattccggtggcgggcatgtcgcattagtccgcctgcggctcgacatc
gcgtatgacgggaccgatttcgccggctgggcggtgcaggcgggtcagcgcacggtcgcc
ggggtgatcgacgaggcgctctcgacggtgttccgcacgccggtggtgacgcgtaccgcg
ggccgtaccgacaccggggtgcatgccaccggtcaggtggcccacgtcgacgtccccgtc
gatgccgtcgcgcacgcatacccccgcacgacccggccgggggatgccgaattcaccccg
ctggtgcgccgattggcgcggttgctgccgaccgacgtccggatccgcgacatcgtgcgg
gctcctgccggtttcgacgccaggttctcggcgcttcgccggcactacacctaccggctg
agtctcgcgccttacggcgtggagccggccgaagcgcggttcgtcacgccgtggtcgaag
ccgctcgaccttgatgcgatgacggtcgcgtctcgggagttggtcgggctcaacgatttc
gcggcgttctgccgacatcgaccgggcgccactacgatccgggatctgcagcggctggag
tgggtccgtgatggccactatgtgacggcgcatgtcaccgcggatgccttctgctggaac
atggttcgctcgctggtcggtgcgctgctggcggtcggggagggtaggcggccggtttcg
tggactgctgggctcttgagtgagacgagtcgatccagtgatttcgcggctgcccctgcc
cgggggctgacgctggtacaggtcgattacccagccgatgaccagctcgaagctcgcaac
ctgatcacccgggacgtgcgaacggccgactga
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