Mycolicibacterium farcinogenes: K6L26_25670
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Entry
K6L26_25670 CDS
T07595
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mfg
Mycolicibacterium farcinogenes
Pathway
mfg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mfg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K6L26_25670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfg03021
]
K6L26_25670
03400 DNA repair and recombination proteins [BR:
mfg03400
]
K6L26_25670
Enzymes [BR:
mfg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K6L26_25670
Transcription machinery [BR:
mfg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K6L26_25670
DNA repair and recombination proteins [BR:
mfg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K6L26_25670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QZH65337
LinkDB
All DBs
Position
complement(5365689..5369654)
Genome browser
AA seq
1321 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRNWSFGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITSVDDEMRHNELSTLEAEMAVERKAVEDQRDSDLEARAQKLEAD
LAELEAEGAKSDVRRKVRDGGEREMRQLRDRAQRELDRLDEIWTTFTKLAPKQLIVDEVL
YRELQDRYGEYFTGAMGAESIKKLIENFDIEAEAESLRETIRSGKGQKKLRALKRLKVVA
AFQQSGNSPLGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGKPLAMPRLDMVTGLYYLTTLVEGDKGEYA
PAGKDSPEQGVYSSPAEAIMAMDRGALSVRAKIKVRLTDARPPASVEAALFGSSEHGGWK
PGDAWTAETTLGRVLFNELLPKGYPFVNEQMHKKVQARIINDLAERFPMIVVAQTVDKLK
DAGFHWATRSGVTVSMADVLVPPQKQEILERHEAEAEAIERKYQRGALNHNERNESLVKI
WQDATEEVGKALEEYYPADNPIITIVKSGATGNLTQTRTLAGMKGLVTNPKGEFIPRPIK
SSFREGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVRENDCETERGI
IVTLAERAADGSLIRDAHVETSAFARTLATDAVDADGNVVIERGHDLGDPAIDALLAAGI
SQVKVRSVLTCGSAAGVCAKCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQ
GGVTGGADIVGGLPRVQELFEARIPRNKAPIADVAGRVRLEESDKFFKITIVPDDGGEEV
VYDKLSKRQRLRVITHEDGSEGVLSDGDHVEVGDQLMEGSADPHEVLRVQGPREVQIHLV
KEVQEVYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLTERAEFETENRRVVA
EGGEPAAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLQGLKENVIIG
KLIPAGTGIARYRDIQVQPTEEARAAAYTIPSYEDQYYSPDFGQATGAAVPLDDYGYSDY
R
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacgtcaacttcttcgatgaactccgcatcggcctggccactgcggacgacatc
cgcaactggtccttcggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
cccgagaaggacggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggtaagtacaagcgcgtccgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtcactcgcgccaaggtgcgccgtgagcggatgggccacatcgaactggccgcaccc
gtcacgcacatctggtacttcaagggtgttccgtcgcggttgggctacctgctcgacctg
gccccgaaggatctggaaaagatcatctacttcgcggcctacgtgatcacctccgtcgac
gacgagatgcgccacaacgagctgtccacgctcgaggccgagatggccgtcgagcgcaag
gccgtcgaggatcagcgcgactccgacctggaggcccgggcacagaagctcgaggccgac
ctggccgagctcgaagccgagggtgccaagtccgacgtccgccgcaaggtgcgcgacggc
ggcgagcgtgagatgcgtcagctccgcgaccgggcccagcgtgagctggaccggctcgac
gagatctggaccaccttcaccaagctggctcccaagcagctcatcgtggacgaggtgctc
taccgcgagctgcaggaccgctacggcgagtacttcaccggcgccatgggcgcggagtcg
atcaagaagctcatcgagaacttcgacatcgaggccgaggccgagagcctgcgtgagacc
atccgcagcggcaaggggcagaagaagctgcgcgccctcaagcgcctgaaggtcgtcgcg
gccttccagcagtcgggcaactccccgctgggcatggtgctcgacgccgtcccggtgatc
ccgccggagctgcgtccgatggttcagctcgacggtggccgcttcgccacctccgacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccggctcaagcgactgatcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcgcatgcttcaggagtcggtggacgcg
ctgttcgacaacggccgtcgcggccgtccggtcaccggtccgggcaaccgtccgctcaag
tcgctgtccgatctgctcaagggcaagcagggccgcttccgtcagaacctgctgggtaag
cgcgtcgactactcgggccgttcggtcatcgtggtcggcccgcagctcaagctgcaccag
tgcggtctgccgaagctcatggctctcgagctgttcaagccgttcgtgatgaagcgtctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtggagcgtcagcgt
ccccaggtgtgggatgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gcacctacgctgcaccgcctgggtatccaggccttcgagccgcagctggtggaaggcaag
gccatccagctgcacccgctggtgtgtgaggcgttcaacgccgacttcgacggtgaccag
atggccgtgcacctgcccctgtcggcagaggcgcaggccgaggcccgcatcctgatgctg
tcgtcgaacaacatcctgtcgcccgcgtcgggtaagccgctggccatgccgcgtctggac
atggtgaccggcctgtactacctgaccaccctcgtcgagggtgacaagggcgagtacgcg
ccggccggcaaggattcgccggagcagggtgtgtacagcagcccggccgaggccatcatg
gcgatggaccgcggcgccctgtcggtgcgcgccaagatcaaggtgcggctgaccgacgcg
cgtccgccggccagcgtcgaggctgcacttttcggctcctccgagcacggtggctggaag
ccgggcgacgcctggaccgcggagaccacgctgggccgggtgctcttcaacgagctgctg
cccaagggctacccgttcgtcaacgagcagatgcacaagaaggtccaggcccggatcatc
aacgatctggccgagcgcttcccgatgatcgtggtggcgcagaccgtcgacaagctcaag
gacgccggtttccactgggccacccgttcgggtgtcacggtctcgatggccgacgttctg
gtgccgccgcagaagcaggagatcctggagcggcacgaggccgaggccgaggcgatcgag
cgcaagtaccagcgcggcgcgctgaaccacaacgagcgcaacgagtccctggtcaagatc
tggcaggacgccaccgaagaggtgggtaaggcgctggaggagtactacccggccgacaac
ccgatcatcacgatcgtgaagtccggcgccacgggtaacctcacccagacccgcaccctg
gccggcatgaagggtctggtgaccaacccgaagggtgagttcatcccgcgcccgatcaag
tcctcgttccgtgagggcctgacagtgttggagtacttcatcaacacccacggtgcccgt
aagggtctggccgacaccgctcttcgtaccgccgactcgggttacctgacccgtcgtctg
gtggacgtgtcgcaggacgtcatcgttcgcgagaacgactgcgagaccgagcgcggcatc
atcgtcacgctggccgagcgcgctgcggacggttcgctgatccgcgacgcccacgtcgaa
acctcggcgttcgcccggaccctggccaccgacgcagtcgatgccgacggcaacgtcgtc
atcgagcgcggccatgacctgggtgacccggccatcgacgcgctgctggctgccggcatc
tcgcaggtgaaggtccgctccgtgctgacctgtggctcggctgccggtgtgtgtgccaag
tgctacggccgttcgatggccaccggcaagctggtcgacatcggcgaggccgtcggtatc
gtcgccgcccagtccatcggtgagcccggtacccagctgaccatgcgtaccttccaccag
ggtggtgttaccggtggcgccgacatcgtcggtggtctgccccgcgtgcaggagctgttc
gaggctcgtatcccgcggaacaaggcgcccatcgccgacgtcgcgggccgggtccggctg
gaggagagcgacaagttcttcaagatcaccatcgttcccgacgatggtggcgaggaagtt
gtctacgacaagctctccaagcgtcagcgcctgcgcgtgatcacccacgaggacggctcc
gaaggcgtgctgtccgacggtgaccacgtcgaggtcggcgaccagctgatggaaggctcc
gccgatccgcacgaggtgctgcgtgtccagggcccccgcgaggtgcagatccacctcgtc
aaggaggtccaggaggtctaccgggcccagggcgtgtcgatccacgacaagcacatcgag
gtcatcgtccggcagatgctgcgtcgcgtcacgatcatcgactcgggcgccacggagttc
ctgcccggttcgctcaccgagcgggccgagttcgagaccgagaaccgtcgcgtcgtggcc
gagggcggcgagcccgcggccggacgtccggtgctgatgggtatcaccaaggcatcgctg
gccacggattcgtggctgtcggcggcgtcgttccaggagaccacccgcgtgctgaccgat
gcggcgatcaactgccgcagcgacaagctgcagggtctgaaggaaaacgtgatcatcggc
aagctgatcccggccggtaccggcatcgcccgttaccgcgacatccaggtgcagccgacc
gaagaagcccgcgctgcggcgtacacgatcccgtcctacgaggatcagtactacagcccg
gacttcggccaggccaccggtgctgcggtgccgctggacgattacggatacagcgattac
cgctag
DBGET
integrated database retrieval system
