Candidatus Methylacidiphilum fumarolicum: MFUM_0552
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Entry
MFUM_0552 CDS
T09357
Symbol
nifA
Name
(GenBank) Nif-specific regulatory protein
KO
K02584
Nif-specific regulatory protein
Organism
mfh
Candidatus Methylacidiphilum fumarolicum
Pathway
mfh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mfh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MFUM_0552 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mfh03000
]
MFUM_0552 (nifA)
Transcription factors [BR:
mfh03000
]
Prokaryotic type
Helix-turn-helix
Other families
MFUM_0552 (nifA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
GAF
Mg_chelatase
AAA_16
AAA_2
bpMoxR
AAA
TIP49
GAF_2
AAA_19
HTH_28
GAF_3
Parvo_NS1
Hydrolase_2
AAA_3
AAA_7
Motif
Other DBs
NCBI-ProteinID:
CAI9084936
LinkDB
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Position
MFUM:complement(563873..565462)
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AA seq
529 aa
AA seq
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MKKNGELVAIYEISKILASSHSQLEKLLRESLKILSLNLKLLRTVIFIKEAQTPKILASY
GIFDPQEHISFYQSFIEQIFKNGFPVVIPDLYAELYSNEEIKPNECSENPLSLFCIPIRS
ERECLGVLVCERKRESALDSLSETTQILSLAANLFGQKIKLCMDGSLSQETQERSEASSY
RLKHDSFKTRTANGVIGQSKQMQAVLDLVYHVAPSRSTVLLRGESGTGKEVIARTIHYLS
PRKEGPFIKVNCSALPETLLESELFGHEKGAFTGALFERKGRFELAHGGTLFLDEIGDIS
PAVQVKLLRVLQEREFERVGGNKTIRVDVRVITATNKNLEDAVLKGEFRADLYFRINVVS
IFLPPLRERKEDIPLLAEHILNKIGKDLNRKLKITPEALNLLINCHWPGNVRELENCLER
AATNSKNNWIEEVDVACRRNQCSSPILWKKDLHVVSTPIISSTEETFHKEETHRPSFYSP
LVSDDPKEKIIQAMEKCGWVQAKAARLLNITPRQLGYALKKYGIAIKKF
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaatggtgaattggttgccatctatgaaatcagtaaaatactggcttcttcg
cattctcaattagaaaagttattaagagaatctttaaaaattttaagtttaaatctaaaa
ttacttagaacggtaatattcattaaagaagctcaaactcctaagattttagcctcttat
ggaatatttgatccccaggagcatatttcattttaccaatcctttattgaacagatcttt
aaaaatgggtttcctgtcgtcattccagatctctatgcagagctttactccaacgaggaa
atcaagcccaatgagtgctcagaaaaccctctttctcttttttgcatcccaatccgatcc
gaaagagaatgtttaggcgttctggtttgtgaaagaaaaagggaatcagcgcttgattcc
ctttcagaaactactcaaattcttagtttagctgctaatctttttgggcaaaaaataaaa
ctctgcatggacggctccttgtctcaagagactcaagagaggtcagaagctagttcctat
cgtttaaaacatgactcatttaagacaagaactgccaacggagtcatagggcagagcaag
cagatgcaagccgtactagatcttgtctatcatgtggctccctctcgttctactgttttg
ctccgtggagaaagcggcacaggaaaagaggtgattgccagaacaattcattatctcagt
cctagaaaagaggggccttttattaaagtaaactgttctgctctgccagaaaccctgctt
gaatcagaacttttcggtcatgaaaaaggagcttttactggcgcccttttcgaaagaaaa
ggtcggttcgaactggcccatggcggcaccttattcctggacgaaataggggatatatca
ccggctgttcaagtgaaactgctacgggtccttcaagaaagagaatttgaaagagtggga
gggaacaaaacgattcgagtggatgttagagtcattacggccacgaacaaaaatcttgaa
gatgctgtgcttaaaggagagtttcgagccgatctttattttcggataaatgtggtttct
atctttctgccgcctttacgagagcgaaaagaagatattcccctgttggccgagcatatt
ttgaataaaatcgggaaggatttgaatagaaaattaaaaattactccggaagcccttaat
cttttaatcaattgtcattggcccgggaatgtaagggaattagaaaattgtctggaaaga
gccgcaaccaattcaaagaataactggattgaagaagtggacgttgcctgccgtagaaac
caatgttcctctcccattttatggaaaaaagatttacatgtagtctccacccccatcatc
tcttccaccgaagagacttttcacaaagaagaaacccatagaccttctttttacagtcca
ttggtatctgacgatcctaaggaaaaaatcattcaagcaatggaaaaatgtggttgggta
caagctaaagccgcacgtctactaaacattacccctagacagctcggttatgctctgaaa
aaatacggaatagcaatcaaaaaattctaa
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