Candidatus Methylacidiphilum fumarolicum: MFUM_0920
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Entry
MFUM_0920 CDS
T09357
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mfh
Candidatus Methylacidiphilum fumarolicum
Brite
KEGG Orthology (KO) [BR:
mfh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfh03016
]
MFUM_0920
Enzymes [BR:
mfh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MFUM_0920
Transfer RNA biogenesis [BR:
mfh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MFUM_0920
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
CAI9085295
LinkDB
All DBs
Position
MFUM:complement(917414..918550)
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AA seq
378 aa
AA seq
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MEQNKQLNLLSFSTTNRKVQWIEENNSLQEYLSILDPLKPIAIDIEGDSLHHYPEKLCVI
SLCQEGFLAVVDCLKGDLSSLWKMLSGCEWICHGMDYDLKMLRRAGCPQPQKIFDTHIAA
KLCGFDSVGYADLVSLFFQVKLSKEHQKADWSRRPLPLSLVHYTAKDVLYLEKLKDILSK
LLKSLGRSEWMEQSCERIRRKIEKSLSKPPYKDPERIEGFQKLDPFGQSILLEIQRWRQE
LALSKGIPPFKIIRTEDLIQISSISSQGESVLKIPAVKQLEKSIRYSLLQAIEKGKQNGP
HKEPLVSKPFYFMDKESSKRFEELKNKRNKIASSLGLDPGLIASKALLSEMAMDPKTIRQ
RLIENDKLCPWQAELLGL
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaataagcaattaaacttgctctctttctcaaccacgaatcgaaaagtacaa
tggattgaggagaacaattcgctccaagaatatttatccatattagatcctttaaaacca
atcgccattgatattgagggagatagtcttcaccattatccagaaaaactttgcgttatt
tccttatgccaagagggttttcttgccgttgtcgattgcttaaaaggcgatctctcgtct
ctttggaaaatgctcagtggctgtgagtggatttgtcatggaatggattatgatttaaag
atgctaagaagggccggatgccctcagccacaaaaaatcttcgatacccatatcgctgct
aagctttgcggatttgattctgttggttatgctgatctagtttccctattttttcaagtt
aaattgtccaaagaacatcaaaaagccgattggtccagaagacctttacccttatccctt
gttcattacacggccaaagatgtcctttatcttgaaaaacttaaggacattttatcaaaa
cttcttaaaagtttaggaagatctgaatggatggaacaaagctgtgaaagaattcgaaga
aaaattgaaaaatctctttctaaaccaccatataaagatcctgaaagaatcgaaggattt
caaaaactcgatccgtttggtcaatctattctgcttgaaatacagcgatggcgccaagaa
ctagccctatcaaaaggcattccgccttttaaaatcataagaactgaagatctcattcaa
ataagttccatctcctctcaaggggaatcagttttaaaaattcctgctgttaaacagcta
gaaaaaagcatccgttatagcctattgcaagcgatagaaaaaggaaaacaaaatgggcct
cacaaagaaccgctcgtctcaaaaccgttttacttcatggataaagaatcttccaaaaga
tttgaagaactaaaaaacaaacgcaacaagattgcttcttcccttggtttagatcctggt
ctaatagcttctaaagcccttttaagcgaaatggccatggaccctaaaacgattcgacaa
agattaattgaaaatgataagctttgtccctggcaagcggaactgttgggattataa
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