Candidatus Methylacidiphilum fumarolicum: MFUM_1681
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Entry
MFUM_1681 CDS
T09357
Name
(GenBank) HD-superfamily hydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
mfh
Candidatus Methylacidiphilum fumarolicum
Brite
KEGG Orthology (KO) [BR:
mfh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfh03019
]
MFUM_1681
Messenger RNA biogenesis [BR:
mfh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MFUM_1681
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
HD
TraI_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CAI9086012
UniProt:
A0ABN8XJ66
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All DBs
Position
MFUM:1620369..1621451
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AA seq
360 aa
AA seq
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MQTEEKIKSLSELSERIGQIESLSGNIRCQLVSTKESTTRNGSFFLDIEIADHSGNKKIK
IWQESKAYASFLTLPKNAFVEFSATFRNSSYGLQAIVHTLRVLSQEEIQELLEQNQNAEI
QADWELLQKKIDSIADPRLCRLCSQFLIDYGERLKRAAAAREYHHNFRGGLLRHVCQMIQ
AAEGLMAAYPGYNWDLIKAGILFHDCGKLWENDFQEQGFVMKRSKTAELIGHIPIGVEIV
NSLWRSLQHREEFHRALIPPSDLVRVHLLHLIVAHHGLREYGSPVTPRTPEAWILHILDN
LDAKLEMFRCAYEEGKEVVPGIFERRPPLEGYPIAPLGKYTPNPMPLEQTEETSPENLID
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcagacggaagaaaaaataaagagccttagcgaactttctgaaagaataggacaaatt
gaaagtttaagtgggaatattcgctgccaactagtatcaacaaaagaatctactacccga
aatggttcttttttcctggatatagaaatagcagaccattcaggaaacaaaaaaattaaa
atatggcaggaatcaaaagcctatgcttcttttttaacactgcccaagaacgcctttgtc
gaattttcagcgacttttcgcaatagctcttatggtttgcaagcgattgtccatacgctg
agggttttaagccaagaagaaatacaagaacttcttgaacaaaaccaaaatgctgaaatt
caagcggattgggaattgcttcaaaaaaaaatagattccatagcagatcctcgcctttgt
cgcttatgttcccaatttctaatcgactatggagaaagattaaaaagggcagcagctgct
agagaataccatcataatttccgtggtggcttgctcagacatgtatgccaaatgatccaa
gctgccgaaggattgatggcagcttatcctgggtacaactgggaccttatcaaagcgggg
atccttttccatgattgtggaaaactctgggaaaacgattttcaagaacagggatttgtc
atgaaaagaagcaaaacagccgaactcattggacatatcccaataggggtagaaattgtc
aactccttatggagaagcctgcaacatagggaggaatttcacagagcgttgattccccct
tcggatctggtccgagtccatctccttcacttaatcgttgcccatcacggtcttagagaa
tatggctcacctgtgaccccaagaactccagaggcttggattctccatatcctcgataat
ctggatgcaaaattagagatgtttcgttgcgcttatgaagagggaaaagaagtcgttcct
ggaatctttgaaagaaggcctcctctagaaggctatcctattgctcccttaggcaagtat
acacctaacccaatgcccttagaacagaccgaggagacctcaccagaaaaccttattgat
taa
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