Candidatus Methylacidiphilum fumarolicum: MFUM_1909
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Entry
MFUM_1909 CDS
T09357
Symbol
xseB
Name
(GenBank) Exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
mfh
Candidatus Methylacidiphilum fumarolicum
Pathway
mfh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mfh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MFUM_1909 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfh03400
]
MFUM_1909 (xseB)
Enzymes [BR:
mfh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
MFUM_1909 (xseB)
DNA repair and recombination proteins [BR:
mfh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
MFUM_1909 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Cortex-I_coil
Haem_bd
Motif
Other DBs
NCBI-ProteinID:
CAI9086231
LinkDB
All DBs
Position
MFUM:complement(1850538..1850783)
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AA seq
81 aa
AA seq
DB search
MSQIDKQSGGEKEMRFEEAFKKLQEIVNSLESGQMPLEDLLQKYEEGRRLLKICDEKLNE
AEQRIIVLSAKQDNGGGAKEN
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
atgagccagatcgacaagcagagtgggggagaaaaagagatgcgatttgaggaagctttc
aaaaaactccaagaaatcgtcaatagcctggaatccggtcaaatgcctttagaagatctc
ttgcagaaatacgaagaaggtagaaggttattaaagatctgtgacgagaagctgaacgaa
gctgaacaaaggatcattgtattgtccgctaaacaagacaatggtggtggagccaaggag
aactaa
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