Candidatus Methylacidiphilum fumarolicum: MFUM_2298
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Entry
MFUM_2298 CDS
T09357
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mfh
Candidatus Methylacidiphilum fumarolicum
Brite
KEGG Orthology (KO) [BR:
mfh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfh03032
]
MFUM_2298 (gyrA)
03400 DNA repair and recombination proteins [BR:
mfh03400
]
MFUM_2298 (gyrA)
Enzymes [BR:
mfh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MFUM_2298 (gyrA)
DNA replication proteins [BR:
mfh03032
]
Prokaryotic type
DNA Topoisomerases
MFUM_2298 (gyrA)
DNA repair and recombination proteins [BR:
mfh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MFUM_2298 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Ldi
Motif
Other DBs
NCBI-ProteinID:
CAI9086606
LinkDB
All DBs
Position
MFUM:complement(2247747..2250362)
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AA seq
871 aa
AA seq
DB search
MKPMAQNSENNEQLSIRDNAPVRMVDVSEEMKSCFLDYAMSVIISRALPDVRDGLKPSQR
RILFAMHELGLAPNRKHLKCAKIVGETMGNFHPHGDQAIYPTLVHMAQPWAMREVLIDGQ
GNFGSIEGDPPAAMRYTEARLSPAGALLMADMEKDTVDFVPNYDETKMEPAVFPAAFPNL
IVNGGTGIAVGMATNIPPHNLSETIDALVALIDQPGLSAEDLLQYIQGPDFPTGGVILGK
EGIVSYFTTGRGSLKVRGEVHFEELRGGKSAIIIDEIPYNVNRAALVEKIGELVNQKIIP
EIADIRDESDENTRVVIELKRDAIPKVVINNLYKHTPLQTTFAVNMVAIDRLRPKSLNLK
ELLFCYLDHRHEVVVRRTRFDLNKALERAEILEGFLIALSQLEDFIRLIRESTNREEARK
KLLELKFPVRLLETLGIVIAQDRITEEGVYSLSLRQVEAILDLRLYQLTGLERGKIASEY
AELLEKIEQFKAILGSEEKIWAIVKQELLEVKEKYGNPRKTKILQEAGEVSFEDLVANQR
VVITLTHNGFIKRTNLDNYRSQRRGGRGVVGMATQEVGKEEEQDFVENLINASTHDYLLF
FTTDGRVYIQRVYELPEKERASKGKNIVNFLELKPTEEIASMLRIVANSEVSDSRESSWD
KNDYIFFCTKKGRVKKTPVTDFQNIRKGGITAISIDENDKLIDCMFTDGQKEIVLITKEG
QSIRFSETLVRSMGRNAAGVIGINLREGDEVVGAAVVDERATLLVVGEKGIGKRTSFEEY
RRQKRGGYGIKTMKTTEKTGKVVSARTVFEEDELMLLTLKGNVIRIKVKDLRKTGRNTQG
VRLVQLDSDDKVTSIARVVPEKEEGEEPLLP
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcctatggcgcagaattctgaaaacaacgagcaactatcaatcagagataacgct
cctgttcggatggtagatgtatccgaggagatgaagagttgttttttagactatgcgatg
tcggtgattatttcaagagccttaccggatgtaagagatggattaaaaccttcccagaga
agaattctttttgctatgcacgagcttgggctagcccctaatcgcaagcatttgaaatgt
gcaaaaattgttggagaaacaatggggaattttcatcctcatggtgatcaagctatctat
ccaacacttgttcatatggctcaaccatgggcaatgcgggaagtgctcatcgatgggcaa
ggcaattttggttccattgaaggcgatccaccggcagccatgcggtatactgaagcccga
ctttctccagctggagctttgctcatggcggatatggagaaggacacggttgattttgtt
cccaattacgatgaaacgaagatggagccagcggttttcccggctgccttccctaattta
attgttaatggaggaacgggaattgctgtgggaatggctaccaatattcctccccataat
ctttctgagactattgatgcattggttgcgttgattgatcaaccaggtctttctgctgaa
gatcttctccaatacatccaaggcccggattttcctactggtggagttatcttggggaag
gaaggcattgtcagttattttactactgggagaggtagtctgaaagtaagaggggaggtg
cattttgaggagttaagagggggcaagtcggcaattattatcgacgaaattccttataat
gtcaacagagctgctttggttgaaaaaattggagaacttgtcaaccaaaagattattcca
gaaattgcggatatacgggatgaatccgacgagaatactcgggtagtgatagaactcaaa
agggatgccataccaaaggttgtcattaataatctctacaaacacacgcccctacagacc
acttttgctgtgaatatggtcgcaattgatcgattgcgtcctaaatcactcaatttaaaa
gaacttcttttttgttacttagatcataggcatgaggtcgtagtcagaagaacccgattt
gatttaaacaaggccctggagcgagcagaaattcttgaaggctttttgattgccttaagc
cagcttgaagattttattcgattaataagagaatcaacgaatcgagaagaagctcgaaaa
aagcttttagagttaaaatttccagtccgtttgcttgaaacgcttggcatagtcattgcc
caggatagaataacagaggaaggagtctatagcctcagcctaagacaggtggaagccata
ctggatttgcgtctttatcaactcactgggctcgaaagggggaaaatagcctctgaatat
gctgaattgcttgaaaaaattgagcaatttaaagcgattttgggaagcgaagagaaaatt
tgggcgattgtaaagcaagagcttttggaagtcaaagagaagtatggcaatcctagaaag
acgaagattctccaagaggcaggggaagttagtttcgaagacttagtggctaaccagcgg
gttgtcatcactctgacgcataatggttttattaaaagaaccaatcttgataattacagg
tcccaaagaagagggggaagaggggtagtgggaatggcgactcaggaggttggcaaagaa
gaggaacaagattttgtcgaaaacctgatcaatgcttccactcatgattatttgctcttt
ttcaccaccgatggcagggtttacattcagagagtctatgagcttccagaaaaagaaaga
gcgagcaagggcaaaaacatagtcaatttccttgagttaaaacctaccgaggagatcgct
tcgatgttgcgaattgttgccaattccgaagtttcagactcaagagagagctcatgggac
aaaaacgattatatttttttctgtaccaaaaaaggacgcgtaaaaaagacccctgttacc
gattttcaaaatatccgaaaagggggcattacagcaattagtattgatgagaatgataaa
ctcatcgattgcatgtttaccgatgggcaaaaggagattgttttaattaccaaagagggg
caaagcataagattttcagaaacccttgttcgttccatgggtagaaatgctgcgggagtc
ataggaattaatcttcgagaaggggatgaagtggttggagcggctgtggtagatgagaga
gcgacgttacttgttgtaggagaaaaggggatagggaaaagaacttcttttgaagaatac
cgtcgacagaagaggggaggctatggaataaagacaatgaaaaccactgagaagacaggc
aaggtggtatcggccaggactgtttttgaagaagatgagctgatgctattgactctcaaa
ggcaatgttatcagaattaaagtaaaagatctccgaaagacaggtagaaatacccaaggg
gtacggcttgttcaattggatagcgatgataaagtcacctcgattgctcgagtagttcct
gaaaaggaggaaggtgaagagcctttgcttccttaa
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