Candidatus Methylacidiphilum fumarolicum: MFUM_2416
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Entry
MFUM_2416 CDS
T09357
Symbol
ydbK
Name
(GenBank) putative pyruvate-flavodoxin oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
mfh
Candidatus Methylacidiphilum fumarolicum
Pathway
mfh00010
Glycolysis / Gluconeogenesis
mfh00020
Citrate cycle (TCA cycle)
mfh00620
Pyruvate metabolism
mfh00650
Butanoate metabolism
mfh00720
Other carbon fixation pathways
mfh01100
Metabolic pathways
mfh01110
Biosynthesis of secondary metabolites
mfh01120
Microbial metabolism in diverse environments
mfh01200
Carbon metabolism
mfh01210
2-Oxocarboxylic acid metabolism
Module
mfh_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
mfh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
MFUM_2416 (ydbK)
00020 Citrate cycle (TCA cycle)
MFUM_2416 (ydbK)
00620 Pyruvate metabolism
MFUM_2416 (ydbK)
00650 Butanoate metabolism
MFUM_2416 (ydbK)
09102 Energy metabolism
00720 Other carbon fixation pathways
MFUM_2416 (ydbK)
Enzymes [BR:
mfh01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
MFUM_2416 (ydbK)
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
TPP_enzyme_C
Fer4_6
PFOR_II
Fer4_7
Fer4
Fer4_10
Fer4_21
Fer4_9
Fer4_2
Fer4_16
Fer4_17
Fer4_4
Fer4_8
Transketolase_C
Fer4_15
Fer4_13
Fer4_18
MCR_beta
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
CAI9086722
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All DBs
Position
MFUM:complement(2382767..2386315)
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AA seq
1182 aa
AA seq
DB search
MAGGLCRTVDANEAVARIAYLLSEVIAIYPITPSSPMGEWVDKWRAERKTNLWGLLPQVV
EMQSEGGVAGALHGALLTGSLASTFTASQGLLLMLPNMYKMAGELLPAVFHVASRTIATH
ALSIFGDHSDVMAARTTGFALLCSHSVQEAADLALIAHLSSLEASLPFLHFFDGFRTSHE
INTIKQIEEGQIKELISVEAILKFRQRGLNPERPLLYGSSQNPDVFFQARERANPFYLAC
PGIVQNVMDRVGALTGRHYKLFEYHGDPQATMVVVVMGSASETLCRVVDSLNSLGYKTGV
VKVRLFSPFDQQSFLKCFPRTTKIIGVLDRCKEPGSVGEPLFVQVASAILNNVDKSWFPF
LDLPRVIGGRYGLSSKEFTPAMAKAVFDHLSKEDPKGSFTVGIEDDLTQSSIAVNESFTI
ENKTLYEAVFYGLGSDGTVSANKNTIKIIGENVGLFAQGYFVYDSKKSGSLTISHLRFGS
SPIAAPYLVEKPDFVGCHQFEFLFKYDILKGIKNGGILLVNSPFSPDETWDKIPREVQQK
ILSERIQFFVIDAYKIAKDCGLGSRINTIMQIAFFELTALIPIDEALDYLREHIRSSYGY
RGEEVVRKNFEALEKALKALCRVKLDGKSLGSVPLLPPVSEEAPEYVKSVIGEMIALRGD
RLPVSAFSPFGAFPTATSQWEKRNISLEVPLWEPSLCIQCGKCVIACPHAVLRAKVYDPT
FVEKAPEGFLKADARYPEWDGLLYTIAVSEADCTGCGICVDVCPAFDKYSPGKKAIHMIS
RRELFTKTKESFFEYFQRIPDVEKEKIDFGSVRQVALLRPLFEFPGACAGCGETPYLKLL
SQLFGDRLLIANATGCSSIYGGNLPTTPWAKDNDGRGPAWANSLFEDNAEFGLGFRLGLD
AIGQWARKFLVQFGESGLVDKNLVQELINVEEKTTKEYSDQRKRIKFLKERLEALKLPES
KIFLTAADYLSKKSVWIVGGDGWAYDIGLGGLIHVLALNFNVKILVLDTEVYSNTGGQAS
KATPRGAVAKFATSGKSTPKMDLALMAISLGNVYVASVSIGADEEHTLSAFTEADAFEGP
SLILAYSHCIAHGIDMSKAMHHQKSVVGSGRWPIFRYNPKGYPDGKRLKLDWDKQVSDLE
KSELMENRFRMLFLSDPEKAEELLALAISDCRNHLDSYKKIG
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggctggaggtttatgcagaacagtcgacgccaatgaggcggttgcaagaattgcttat
cttctgagcgaagtgatagccatctatcccataactccatcttcgcctatgggagagtgg
gtagataaatggagagcagaaagaaaaacaaacctatggggacttcttcctcaggttgtt
gaaatgcaaagtgagggtggagtggctggagcattacatggtgcactcctaactggcagc
cttgcttcaacttttactgcttcccaaggacttttattaatgttgcccaatatgtacaag
atggcaggggaactgcttcctgcagtctttcatgttgcttctagaaccattgctacccat
gcgttatccatttttggtgatcatagtgatgtcatggctgctcgaactacaggatttgct
ctcttatgctcccattctgtgcaagaggctgcagatttggcactcattgcccatctctcc
tctttagaagcctctttaccttttcttcatttttttgatggctttcgaaccagtcatgaa
atcaacaccattaagcaaatagaagaggggcaaatcaaagagcttatttctgttgaggca
attttgaagtttagacagcgtggactcaatcccgaaaggccactgctttatggaagctct
caaaaccccgatgtgttttttcaagctagggaaagagctaatccattttacttggcatgt
cctgggatagtgcaaaacgtaatggatagagtgggggctctcacagggcgtcactataag
ttatttgaatatcatggggatccccaggcaacaatggttgtggttgtgatgggatcggct
tcagaaaccctttgtcgagttgtagatagcttaaattctctaggctataaaactggagtc
gttaaagttagattgtttagtccttttgaccaacaaagttttttaaagtgcttccctcga
accacgaagattattggggtgctggataggtgcaaagagccaggctctgtgggcgaacca
ctttttgtgcaggttgcttcggccatattaaataacgtagacaaaagttggtttccattc
ttggatctgcctcgagtcataggaggcagatatgggctatcatccaaagagtttacccca
gcgatggcaaaagcggtatttgatcacctttcgaaagaggatcctaagggatcatttaca
gtggggattgaagatgatctcactcagagcagcattgctgtcaatgaatcctttactata
gaaaacaaaactctctatgaagcggtattttatggattaggttctgatgggacggtaagt
gctaataaaaatacgatcaaaattattggtgaaaatgtaggtctttttgctcaaggatat
tttgtctatgattctaaaaagtctggttccttgacgatttcacacttgcgatttggatcc
agccccattgctgcaccctatttagtggaaaaacccgattttgtgggctgtcatcagttc
gaatttctttttaaatatgatatcctcaagggcattaaaaatgggggcattttgttagtg
aatagcccttttagtcctgatgaaacctgggataagattccgagggaagtccagcagaaa
atattatcagagcgtatccaattttttgttatagacgcctacaagatcgctaaagactgc
ggcttgggaagcaggataaacacgatcatgcaaatagctttttttgagcttaccgcactc
attccaattgacgaggccttggattatctcagagaacatattcgtagcagttatggatat
cggggagaggaagtggttagaaaaaatttcgaggctttagaaaaggcattaaaagctctc
tgtagagttaaactagatggaaaaagccttggttctgttccgctgctacctccggtttct
gaagaggcgcctgaatatgtgaaaagtgtcattggagaaatgatcgcattgcgtggcgac
agacttcctgtcagtgctttttctccttttggtgcttttcctacggcaacctctcagtgg
gaaaaacgtaatatttcccttgaggtacctctttgggaaccatccctttgtattcaatgc
ggtaagtgtgtcattgcatgtcctcatgcggtgctgcgggctaaagtttatgatccgaca
tttgttgaaaaagctccagaaggttttttaaaagcggatgcaagataccctgaatgggat
ggtttactctacaccattgctgtttcagaagccgattgtacgggctgtggaatatgtgta
gacgtgtgcccagcatttgataagtactctccgggcaaaaaggcaatacatatgataagc
cgtagggagctttttactaaaactaaagagagtttttttgaatatttccaaagaattcca
gacgttgagaaagaaaaaattgactttggatctgtaagacaagtggctcttttgcgtccg
ttattcgaatttccgggagcctgtgctggatgtggggaaacaccttacttgaaattatta
agccaactctttggggataggctgcttattgccaatgctactggttgctcctcgatatat
ggcggcaacttacctactactccttgggcaaaagacaacgatggcagaggacctgcttgg
gcaaattcactatttgaagacaacgcggaatttggtcttggctttcgtctaggattggat
gcgatcggtcagtgggctcgcaagtttttagtccagtttggagaaagtggtttggtagat
aaaaatctagttcaagaattgattaatgtcgaagagaagacgacaaaggaatattcagat
caaagaaagcggattaagtttctcaaggaaagattggaggcattgaaacttccggaatcg
aaaatatttttgacagcggctgattatctttcaaaaaaaagcgtgtggattgtaggagga
gatgggtgggcttatgatattggactaggaggactaatccatgtcctagccttaaatttc
aacgttaaaatattggtattggatacagaagtttattccaatacagggggacaagcttcg
aaagcaaccccaaggggagcagtggcaaaatttgcgacttctggcaaatcaactcccaaa
atggatcttgcccttatggcaatatccttgggtaatgtgtatgtagcttcggtctccatt
ggcgccgatgaagagcatacgcttagtgcttttacagaagccgatgcttttgaaggtcca
agccttatcttggcttattctcattgtattgctcatggtattgacatgtccaaggcaatg
caccatcaaaaatcggttgtcggttcaggacgttggccaatttttcgttataatccaaaa
ggttatccagatgggaaacgccttaaattagattgggacaaacaagtaagtgatcttgaa
aaatctgaacttatggaaaataggtttagaatgctttttttaagcgatccagagaaggcc
gaagaactactagcactggctatttccgattgtcggaatcatctcgattcttacaaaaag
atcggttaa
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