Methanobacterium formicicum DSM1535: DSM1535_0049
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Entry
DSM1535_0049 CDS
T03743
Symbol
phr
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mfi
Methanobacterium formicicum DSM1535
Brite
KEGG Orthology (KO) [BR:
mfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfi03400
]
DSM1535_0049 (phr)
Enzymes [BR:
mfi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
DSM1535_0049 (phr)
DNA repair and recombination proteins [BR:
mfi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
DSM1535_0049 (phr)
Prokaryotic type
DSM1535_0049 (phr)
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Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CEA12415
UniProt:
A0A090I3Y1
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All DBs
Position
1:complement(43559..44920)
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AA seq
453 aa
AA seq
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MIPVPCIKKLNQNPLKDGDYVLYWMQASPRVHTNHALEYSIKKANQIKKPLLVFFGITNQ
FPEANNRHYTFLLQGLQDVQNALEKQGINMAIQMVSPPEGALELAENASMVVVDRGYLSI
QREWIQKVIDGLQCPLIQVETNVVIPVETASSKEEYSAATIRRKINKKLDEFLIPLKREK
LSTRFSDLDVDSLSLDDVDSIISRLGSKSKVVPVAKYEGGTGNAIKLLDTFIKHKLDKFP
DRNDPSTDYLSHMSPYLHFGQISPLHIALEVLKTKSPGKSAYLEELIIRRELAVNFVYHN
HEYDKLKCLPDWAYNTLMEHRKDKREYIYSFEEFENAETHDPYWNAAQLEMVHSGKMQGY
MRMYWGKKILEWTQNPEEAHQIALKLNNRYELDGRDPNGYAGVAWCFGKHDRAWKEREIF
GKVRYMNDQGLRRKFKMDSYLDAVNNLVDSSVS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgatccctgtcccatgtattaaaaaactaaaccagaatcctttgaaggatggagattat
gtcttatactggatgcaggcctctccccgggtacacactaaccatgcactggaatacagc
ataaaaaaggccaaccaaattaaaaagcctttattagtatttttcgggataaccaaccaa
tttccagaggccaataatcggcactacacctttctactccagggacttcaggatgttcaa
aatgcactggaaaaacagggaataaacatggcaattcagatggtctccccgccggaaggt
gccctggaactggcagagaatgcttcaatggtggttgtggataggggttatctgagcata
caacgtgaatggatccaaaaagtcatagatggactacaatgtccgttgatacaagtggaa
accaacgtagtaattcccgtggaaactgcctcgtctaaggaagagtattctgcagccact
atccgcaggaagatcaacaaaaaactggatgaatttttaatacccctgaaaagagaaaaa
ctaagtactcgttttagtgatcttgatgtagattcactgtcccttgatgatgtagattcc
atcatctcgcgattagggtcaaaatctaaagtagtccctgtagctaaatatgagggtgga
actgggaatgccattaaactactggatactttcattaaacataagctggacaaatttcca
gatagaaatgatcccagcacggactacctgtcccatatgagtccctacctccatttcggt
cagatatctccgttacatatagcactggaagttttgaaaaccaaaagtccgggtaaatct
gcctacctggaagaactcatcatccgcagggaactggctgtgaatttcgtataccacaac
catgaatacgataaactgaaatgtctcccggactgggcatataacacccttatggagcat
cggaaggataaaagagaatatatttactcctttgaagaatttgaaaatgcagaaacccat
gatccttactggaatgcagcgcaactggaaatggtacattctggtaagatgcagggatac
atgcgcatgtactggggtaaaaaaatcctggaatggactcaaaacccggaagaagcccac
caaatagctcttaaacttaacaaccggtatgaattagatggtcgtgaccccaatggttat
gccggggtggcctggtgtttcgggaaacatgaccgggcctggaaagaacgggagatattt
ggtaaggtacgttacatgaatgaccagggtttacgacgtaaatttaaaatggatagttac
ttggatgcagttaataacctggtagattcatcagtgtcctga
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