KEGG   Methanobacterium formicicum DSM1535: DSM1535_0174
Entry
DSM1535_0174      CDS       T03743                                 
Symbol
tbp
Name
(GenBank) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
mfi  Methanobacterium formicicum DSM1535
Pathway
mfi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mfi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    DSM1535_0174 (tbp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mfi03000]
    DSM1535_0174 (tbp)
   03021 Transcription machinery [BR:mfi03021]
    DSM1535_0174 (tbp)
Transcription factors [BR:mfi03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    DSM1535_0174 (tbp)
Transcription machinery [BR:mfi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     DSM1535_0174 (tbp)
  RNA polymerase III system
    TFIIIB
     DSM1535_0174 (tbp)
  RNA polymerase I system
    SL1/TIF-1B
     DSM1535_0174 (tbp)
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-ProteinID: CEA12539
UniProt: A0A090I170
LinkDB
Position
1:complement(177079..177624)
AA seq 181 aa
MTKVEIKVENIVTSATLGKDIDLPQVAPALEGVEYNLEQFPGLVYKIKEPKTAALIFGSG
KLVCTGAKSIENSIKAIHIAVDKMRALDPDIPHEFEIKVQNIVASANLDKTLNLEAVALD
LENTEYEPEQFPGLVYRLGEPKVVLLLFGSGKVVCTGAKTIADAQLGVEKTKERLAELDL
L
NT seq 546 nt   +upstreamnt  +downstreamnt
atgacaaaagttgaaatcaaagtggagaacatagttacttccgcaacgcttgggaaagat
atagaccttccccaagtcgcacccgcgttggaaggtgtggaatataacctcgaacaattc
cccggattggtttataagattaaagagcctaaaacagctgctttaatatttggatccggc
aaattagtgtgcacaggtgcaaagtccattgagaactcgataaaagcaattcacattgct
gtggacaaaatgcgcgcattagaccctgatataccccacgaatttgaaattaaagttcag
aacatagttgcttctgctaatttggataagactcttaacctggaggcagtggccctggac
ctggaaaacaccgaatacgaaccagaacaattccctggtctggtttaccgattgggtgaa
ccaaaagtagtactattactattcggatcaggaaaagtagtatgtacaggtgcaaaaact
atcgcagacgcacaacttggtgtagaaaaaacaaaggaaagattagctgaattagattta
ttataa

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