Methanobacterium formicicum DSM1535: DSM1535_0180
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Entry
DSM1535_0180 CDS
T03743
Symbol
fen
Name
(GenBank) Flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
mfi
Methanobacterium formicicum DSM1535
Pathway
mfi03030
DNA replication
mfi03410
Base excision repair
mfi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSM1535_0180 (fen)
03410 Base excision repair
DSM1535_0180 (fen)
03450 Non-homologous end-joining
DSM1535_0180 (fen)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfi03032
]
DSM1535_0180 (fen)
03400 DNA repair and recombination proteins [BR:
mfi03400
]
DSM1535_0180 (fen)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mfi04147
]
DSM1535_0180 (fen)
DNA replication proteins [BR:
mfi03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
DSM1535_0180 (fen)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
DSM1535_0180 (fen)
DNA repair and recombination proteins [BR:
mfi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DSM1535_0180 (fen)
Exosome [BR:
mfi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DSM1535_0180 (fen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
EMC3_TMCO1
CRISPR-assoc_prot_CsaX
dsRBD2
Motif
Other DBs
NCBI-ProteinID:
CEA12545
UniProt:
A0A090I4B2
LinkDB
All DBs
Position
1:182651..183637
Genome browser
AA seq
328 aa
AA seq
DB search
MGVKFKDIVSSEEIRFEDLNGKVVALDAANVIYQFLSSIRQLDGTPLKDQNGRVTSHFSG
ILYRTSSLVEKGMKPVYVFDGRSSALKKETQQKRKEIKEESERRWKEALEEGRLDDARKF
AVRSSRMSPEIVEGSKKLLKLMGIPYIQAKGEGEAQASYMVERGDAWCVASQDYDCILFG
ASRMVKNLTISGGQASPELIQLNKILKNLDVTRQQLVDLAIMVGTDFNQGIKGIGAKKGL
KLIKKHGDIYHALEHLDVELDVDPDILRDMFLNHEVESHYQLKWQKANPEEIVEFLCREH
DFSEDRVLTAVDKLKKLETTQSSLEQWF
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgaagttcaaggatattgtatcttccgaagaaatcaggtttgaggatcttaat
ggtaaagtggtggctctggacgcagcgaatgttatttaccagtttctttccagtattcgc
cagctagacggcacccctctcaaagaccagaacgggcgagtgacctcgcattttagtgga
atactgtatcgtacatcttccctggtagaaaagggaatgaaaccggtttatgtttttgac
gggcggtccagtgctcttaaaaaggagactcaacagaaaaggaaagagatcaaagaggaa
tcagaacgcagatggaaagaagctctggaagaagggcgtttggatgatgcccgaaaattt
gcggtgagatcttcacgcatgtctcccgaaatcgtggaagggtccaaaaagcttcttaaa
ctcatgggaatcccttatatccaggctaaaggggaaggagaagcccaggcctcttatatg
gtggaacgtggtgatgcttggtgtgtggcctcccaggattacgattgtattttattcgga
gcttcccgcatggttaagaacctgaccatcagtgggggccaggcctctccagaactcatc
cagctgaataagatcctgaaaaatctggatgtaacccgccagcaactggtggatctggcc
ataatggtaggtacagatttcaaccagggaatcaaaggtattggggcaaagaagggtttg
aaactcattaaaaaacacggcgacatatatcatgccctggaacacttggatgtggagctg
gatgttgatccggatattttacgggatatgttcctcaaccatgaagttgaatcccactac
cagttgaaatggcagaaggccaatccagaagaaattgtggagttcttatgccgagaacat
gatttttccgaagacagggtattgactgccgtggacaaactgaaaaaactggaaaccacc
cagagcagcctggaacagtggttctag
DBGET
integrated database retrieval system
