Methanobacterium formicicum DSM1535: DSM1535_0300
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Entry
DSM1535_0300 CDS
T03743
Symbol
rpoD
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
mfi
Methanobacterium formicicum DSM1535
Pathway
mfi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mfi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DSM1535_0300 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfi03021
]
DSM1535_0300 (rpoD)
Enzymes [BR:
mfi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DSM1535_0300 (rpoD)
Transcription machinery [BR:
mfi03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
DSM1535_0300 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Fer4
Fer4_10
Fer4_7
Fer4_9
Fer4_6
RNA_pol_L_2
Fer4_21
Fer4_16
Fer4_15
Fer4_2
Fer4_13
Fer4_8
Motif
Other DBs
NCBI-ProteinID:
CEA12664
UniProt:
A0A090I1G0
LinkDB
All DBs
Position
complement(315933..316733)
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AA seq
266 aa
AA seq
DB search
MEIEINNQDNNQMVFTVEGADVSLVNALRRICMVEVPTLAIETVEFLKNDARIFDEALAH
RLGMVPISTDLESLVLASECDCDDHCPRCSVSLVLKGKGPKTLYSGDLKSEDPNLKPVLD
TIPLVKLKEGEEVELEAIAQLGQGKEHAKWQPTTTCAYKNYPQITIDGDKCESCLQCVQE
CPRNVLEFDEEKNQIKVVDLENCSMCRTCMKDCPNQAINVEIVEDKFIFRIETDGSLSPT
QVLSRACDMLSEKADKIVTFCEEGGS
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggagatagaaattaataaccaggacaacaaccagatggtcttcactgtggaaggtgcc
gacgtcagcctggttaatgccctgcgccggatctgtatggtggaagttcccacattagcc
attgaaactgtggagttcttaaaaaacgatgcacgtatattcgacgaagcattggcccac
cgactaggaatggtacctatcagcaccgacctggaatcactggtactggcatcagaatgt
gactgtgacgatcactgccctcgctgcagtgtatccctggtcctcaagggaaaaggacca
aagacactctactccggggatcttaaatcggaagaccccaatttaaaacctgtactggac
accattccactggtaaaactcaaagaaggagaagaagtggaactggaagccatagcacag
ttaggacagggtaaggaacacgccaaatggcaacccaccaccacctgtgcctacaaaaac
tatccccagatcaccattgacggggataaatgtgaatcatgcctccagtgtgtgcaggaa
tgtccccgcaatgtcctggaatttgatgaagaaaagaaccagataaaagtggtggacctg
gaaaactgttccatgtgccgaacctgcatgaaggactgtcccaaccaggccattaacgtg
gaaatcgtggaggacaaattcatattccgcattgaaaccgatggttcactatctcccaca
caagtactctctcgcgcatgcgacatgttatcagaaaaagctgataaaattgtcactttt
tgtgaagaaggaggaagttaa
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