Methanobacterium formicicum DSM1535: DSM1535_0305
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Entry
DSM1535_0305 CDS
T03743
Symbol
truB
Name
(GenBank) putative tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mfi
Methanobacterium formicicum DSM1535
Brite
KEGG Orthology (KO) [BR:
mfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfi03016
]
DSM1535_0305 (truB)
Enzymes [BR:
mfi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DSM1535_0305 (truB)
Transfer RNA biogenesis [BR:
mfi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DSM1535_0305 (truB)
Prokaryotic type
DSM1535_0305 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
CEA12668
UniProt:
A0A090I171
LinkDB
All DBs
Position
1:complement(318672..319634)
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AA seq
320 aa
AA seq
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MAELLQKAYGETDPHYGSIPEERPLEEHLSKGIINLDKPSGPTSHEIDAWVKRILKLDKT
GHGGTLDPRVTGVLPIGLDTATRSIQLLLEAPKEYVCLMRLHEDVGEAKIRDILGEFTGK
IFQTPPMRSAVKRELRVRTIYYVNILEIDGQDALFRIGCEAGTYIRKYCHDIGEALGVGA
HMAELRRTRVGDFQEDDTLKTLQDVTDAYHYWIEDGDEAPLRECVLPMERAASHLKKIVV
RDSAIDAVCHGADLAAGGILQLSEGIKRKDTLAIMTLKGELVAAGEALATTTEIDQADKG
IMVNIKKVFMEPGTYPMMWK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcagaactcctccagaaagcctacggggaaacagatccccactacggatcgattccc
gaagaacgaccccttgaggagcacctgtccaagggtatcattaacctggataaaccctcc
ggacccacatcccacgaaatcgatgcctgggtcaaaagaatccttaaactggataaaact
ggtcacggtgggaccctggatcccagggtcaccggtgtgcttcccataggactggacacc
gccacccgatccatacaattactcctggaagcacccaaagaatacgtgtgtctgatgcgc
ctccacgaagatgtgggagaagcaaagatacgggacattctaggagaattcaccggtaaa
atcttccagacaccacccatgcgttcagcagttaaacgggaactccgggtgcggaccatc
tactacgtaaacatcttggagatagatggccaggatgccctgttccgtattggctgtgaa
gccgggacctacatccgtaagtactgccacgatattggtgaagcactgggagtaggagcc
catatggctgaactacgccgaacaagggtgggtgactttcaggaagatgacactctgaaa
acactgcaggatgtcaccgatgcctaccactactggatagaagatggtgacgaagcaccc
ctccgggagtgcgtgctacccatggaaagggcagccagccaccttaaaaagattgtggta
agggattccgccatagacgcagtgtgccacggtgcagacctggccgctggtggaatacta
caactcagtgaaggtataaaacgcaaagataccctggccatcatgaccctcaagggtgaa
ctggtggctgctggtgaggcactggccaccaccacagaaattgaccaggcagataagggc
atcatggtcaacataaaaaaggtttttatggaaccaggaacataccctatgatgtggaag
taa
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