KEGG   Methanobacterium formicicum DSM1535: DSM1535_0538
Entry
DSM1535_0538      CDS       T03743                                 
Symbol
rnz
Name
(GenBank) Ribonuclease Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
mfi  Methanobacterium formicicum DSM1535
Brite
KEGG Orthology (KO) [BR:mfi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mfi03016]
    DSM1535_0538 (rnz)
Enzymes [BR:mfi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     DSM1535_0538 (rnz)
Transfer RNA biogenesis [BR:mfi03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    DSM1535_0538 (rnz)
 Prokaryotic type
    DSM1535_0538 (rnz)
SSDB
Motif
Pfam: Anti-Pycsar_Apyc1 Lactamase_B_2 Lactamase_B Lactamase_B_4 NopRA1
Other DBs
NCBI-ProteinID: CEA12899
UniProt: A0A090I226
LinkDB
Position
1:546483..547391
AA seq 302 aa
MELIFLGTSSALPTTKRNHPSIALKAFGEVMLFDCGEGTQRQMARIKLSPMKVDHIYLTH
LHGDHFLGLPGMIQSMAFRGRKEPLHIYGPEGTIKTVQAIKDLGYYALSFPIHAYEVREG
VILETDNYVIECCPTHHSVLNLAYSVEEKRSPKFLREKAIALGLKPGPDFGKLQNGIPVE
LNGELILPEQVLGEKRRGRKIVYSGDTIPCQELVKFASNADVLIHESTYESSQEKKALEN
GHSTTTQAAEIAKKAKVFELILTHISTRYKNSGDLRKEASQVFREVTVAEDFMTIPVERH
NR
NT seq 909 nt   +upstreamnt  +downstreamnt
atggagttaatatttttaggaacctcatctgcacttcccaccactaaacgaaaccatccc
tccattgcccttaaagcctttggagaggtgatgctctttgattgtggagaggggacccag
cgccagatggccagaatcaaactgagccccatgaaggtggatcatatctatctaacccac
ctacacggggatcatttcctgggactgcccggcatgatacaatccatggccttccgaggc
cgtaaagagccactacacatctatgggcctgaaggaactataaaaactgtccaggccatt
aaagacctgggttactatgcattatcttttcccatacatgcttatgaagtaagagaaggt
gtgattcttgaaacagataactatgtaattgaatgctgtcctacccaccactctgtactt
aacctggcatattccgtggaagaaaaacggtctcctaaattcctccgggaaaaagccatt
gcactgggcttgaaaccaggcccagattttggtaaacttcagaatggaattccagtagag
ttaaatggtgaattaatactgccagaacaggtccttggagaaaaaagaagggggaggaag
attgtttattccggagataccataccctgccaggaactggttaaattcgcatctaatgct
gatgttctcatacatgaatccacttacgaatcatcacaggaaaaaaaagcccttgaaaat
ggccactccactaccacccaggccgcagagattgccaaaaaagcaaaggtatttgaatta
attctaacccatataagcacccgttacaagaacagcggtgatttaagaaaagaagccagc
caggtgttccgtgaagtgactgtggctgaggatttcatgactatccccgtggaacgacat
aaccgttag

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