Methanobacterium formicicum DSM1535: DSM1535_0562
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Entry
DSM1535_0562 CDS
T03743
Symbol
sucD
Name
(GenBank) Succinyl-CoA ligase [ADP-forming] subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
mfi
Methanobacterium formicicum DSM1535
Pathway
mfi00020
Citrate cycle (TCA cycle)
mfi00640
Propanoate metabolism
mfi00660
C5-Branched dibasic acid metabolism
mfi00720
Other carbon fixation pathways
mfi01100
Metabolic pathways
mfi01110
Biosynthesis of secondary metabolites
mfi01120
Microbial metabolism in diverse environments
mfi01200
Carbon metabolism
Module
mfi_M00620
Incomplete reductive citrate cycle, acetyl-CoA => oxoglutarate
Brite
KEGG Orthology (KO) [BR:
mfi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DSM1535_0562 (sucD)
00640 Propanoate metabolism
DSM1535_0562 (sucD)
00660 C5-Branched dibasic acid metabolism
DSM1535_0562 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
DSM1535_0562 (sucD)
Enzymes [BR:
mfi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
DSM1535_0562 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
CEA12923
UniProt:
A0A090I1S6
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All DBs
Position
1:570563..571423
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AA seq
286 aa
AA seq
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MIFLDEDTRCVVQGITGKQGSFHTKSMLEYNTNIVAGTSPGKGGQEFEGVPVYNSIAEIK
EELDVNASIIFIPAPFAKDAAFESISQLELAVIITEHIPVQDSMEITHYARKNDCKVIGP
NTPGIITPGVGKLGIMPTHIFNPGDIGIVSRSGTLTYEVASQITHAGLGQSTCLGIGGDP
VVGMDFADVLQKFQEDPKTKAMAMIGEIGGNAEEKAAEYIAENITKPVVAYIAGRTAPPG
KRMGHAGAIIEGDTGTAESKINALKAAGVEVAQQPSQIADIMKEII
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgatatttcttgatgaagacacacgatgtgtggtgcagggaattaccggtaaacaaggc
tctttccacaccaagagcatgttagaatacaacaccaacatcgtggctggaacatcaccc
ggtaaaggaggccaggaatttgaaggagtcccagtctacaattctattgccgaaataaag
gaagaattggatgttaatgcatcaataatatttatacctgcaccctttgccaaggacgct
gcctttgaatccatatcacagttggaactggccgtgattatcactgaacacatacctgtc
caggattccatggaaataactcattacgcccgaaaaaatgattgcaaagtcattggcccc
aacacccctggaattataacacccggagtgggtaaactaggaatcatgcccacccatata
ttcaatccaggagatattggaatagtatcccgcagtggaaccttgacctatgaagtggcc
agtcagataacccatgctggtctgggtcaaagtacctgtctgggaatcggtggcgacccg
gtggtggggatggattttgcagatgtactgcagaaattccaagaagacccaaaaaccaaa
gctatggccatgatcggggagatcggaggtaatgcggaagaaaaggcggcagagtacatt
gctgaaaacatcaccaaaccagtggtggcctacattgccggtagaactgcccctccaggg
aaaagaatgggacatgccggagccataattgaaggggacactggtactgctgaaagtaaa
ataaatgctcttaaagctgcaggagtggaagtagcacaacaaccatcacaaattgcagat
ataatgaaagaaataatttaa
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