Methanobacterium formicicum DSM1535: DSM1535_1050
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Entry
DSM1535_1050 CDS
T03743
Symbol
mutM3
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mfi
Methanobacterium formicicum DSM1535
Pathway
mfi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DSM1535_1050 (mutM3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfi03400
]
DSM1535_1050 (mutM3)
Enzymes [BR:
mfi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DSM1535_1050 (mutM3)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DSM1535_1050 (mutM3)
DNA repair and recombination proteins [BR:
mfi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DSM1535_1050 (mutM3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_6
Dynein_heavy
NFACT_N
Zn_ribbon_TFIIB
DUF7573
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
CEA13391
UniProt:
A0A090JV79
LinkDB
All DBs
Position
1:complement(1032902..1033714)
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AA seq
270 aa
AA seq
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MAELPELLILSKQMDEQLQLKEFAEGELRQEKSLNLSPGEFLETIRGKKVLKVYNKGKWI
FIQLSDDYHLLLNLGMGADVLYHEAGQSPEEYQCLFQFTDGSYFTSKFWWIGRAELLPDE
ELPQHKATKDIAITPLDPEFTPEYLQNLCQARSQIKNLILNQKKIGGIGNVYIHDILFRA
KLHPQKVANTIESVKIDDLHHIIRENLKKAIELGGLAYEKDFYGENNGFGTEHFLVAYKE
GEPCPECGGTIEKIKTGSTSSYICPNCQKL
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggcagaattaccagaacttttgatcttaagcaaacaaatggatgaacaactgcagtta
aaggaatttgccgagggagagctccgccaggagaaatcattaaacctatctcccggggaa
ttcctggagacaataaggggtaaaaaggtattaaaagtttacaataagggtaaatggatt
ttcatccagctgtctgatgattatcatctgctgctgaacctgggtatgggtgccgacgtg
ctctaccatgaagccggccaatcaccggaagaataccaatgcctcttccagttcaccgac
ggatcctacttcacctctaaattctggtggattggaagggccgaactcctgcctgacgag
gaattacctcaacataaggccaccaaagatattgccatcacacccctggacccagaattc
acccctgaatacttacaaaatctttgccaggcccgttcccagatcaagaacctcatcttg
aaccagaagaaaattggaggaataggaaacgtttacatccacgatatactgttccgggca
aaactacacccgcaaaaggtggccaataccattgaatcagttaaaattgacgatttacac
cacataatccgggaaaacctcaaaaaagccattgaattaggtggactggcctatgaaaag
gatttctacggggaaaacaatggattcggtaccgaacatttcctggtggcctataaagag
ggtgaaccctgtcccgagtgtgggggcaccattgaaaagatcaaaaccgggagcacatcc
tcctatatctgccccaactgtcagaaattgtaa
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