Methanobacterium formicicum DSM1535: DSM1535_1062
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Entry
DSM1535_1062 CDS
T03743
Name
(GenBank) long-chain-fatty-acid-CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mfi
Methanobacterium formicicum DSM1535
Pathway
mfi00061
Fatty acid biosynthesis
mfi00071
Fatty acid degradation
mfi01100
Metabolic pathways
mfi01212
Fatty acid metabolism
mfi02024
Quorum sensing
mfi04146
Peroxisome
Module
mfi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mfi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DSM1535_1062
00071 Fatty acid degradation
DSM1535_1062
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DSM1535_1062
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSM1535_1062
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mfi01004
]
DSM1535_1062
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mfi04147
]
DSM1535_1062
Enzymes [BR:
mfi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DSM1535_1062
Lipid biosynthesis proteins [BR:
mfi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
DSM1535_1062
Exosome [BR:
mfi04147
]
Exosomal proteins
Exosomal proteins of breast milk
DSM1535_1062
Exosomal proteins of breast cancer cells
DSM1535_1062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NAD_binding_4
AMP-binding
Epimerase
AMP-binding_C_3
NAD_binding_10
3Beta_HSD
KR
Motif
Other DBs
NCBI-ProteinID:
CEA13403
UniProt:
A0A090I2Q9
LinkDB
All DBs
Position
1:1044835..1047684
Genome browser
AA seq
949 aa
AA seq
DB search
MPTRVLLSGANGFLGTQIARQLINLPGIEILAMVRSKNREHGLTRLKRAWSDWDELLDAL
KDRVTVIPGDVTREDLGMVRQDYQDLASSITHIIHTVADLRLHAPLEELRLTNVDGTCHL
LKLADLARENGIFRRFSHVSTAYVAGKREGLIVEDPYPENISKEHPKGKGSHHENNPEKP
LANNGFFSNYEESKYEAERVVRESGVPYSIFRPGMVVGDSKTGEIKTFNTVYALFKLYLK
GKLRFIPTNSSLTLNMVPVDYVAHAISNLSFNQEAEGRTFHLTAPPDTLPSIKELLNQVR
VWAREKLDVKLPQPVFIPAAPLIQRITPSSSPGSGVLNILFTLAPYLDEKHTFSRENTEN
LLGPFKLKWEEYLPHLLEYAAYHGFFHRSERTVHEQVLYRLGGRSYPVKYYDITVEGIQE
KPALQVREDIISAYHSLKESGVGPGDRVALVGLNSTRYLTLDVAIGLAGAVSVPLYYTSP
PIEIKNILKASEAKLLFIGTPHLMKRLSELDLDLEIISFCRESQPIPGSIMSWSQFLEKG
KDRETGEKSTVFPQSPVDFDDLATIRYTSGTTGTPKGVTFNQGHMRWMAEAMASLPPWED
RNREVRYLSFLPMNHVVEGILGTYSPYYAPAPLKIYFLEDFNQLASALPLAKPTIFFSVP
RFYEKLWSQLKESFLGNHYAHLKPGILKKILKPLVHRVFLSKAGLDRCSQLIVGSATSSQ
HLIQDYHELGVEIHNAYGLTEAPLVTLNRRGANRIGTVGEPLPQTHLRIAGDGEVMVKGP
QVTPGYFESDITPPKKEGWLLTGDTGFVTPEGSLVITGRKKELIINSYGKSIDPLRIEAL
LRDAPGTNEVMLVGEGKPYLIGLFWVEEEHHPHDIEETIHRVNQDLSRPEQVKRWALLPN
DLSIDGGELTANMKLKREIITQRYQDVIDSLYQKTSHPLILHQGQVEEG
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgccaacccgtgtgttactttctggagccaatggttttctgggaacccagatcgctcgt
cagctgatcaatctcccgggaattgaaattttagccatggtaagatctaaaaacagagaa
catggccttacacgtttgaagagagcctggagtgactgggatgaacttcttgatgcattg
aaagacagggtgacggtgatccccggtgatgtcacccgggaggatctgggtatggtccgt
caggattaccaggacctggcttcaagcataacccatattatccacaccgtggctgacctc
cgcctccatgcaccgctggaagaactccgtctgaccaacgtggatggtacttgccattta
ctcaaacttgccgacttggccagagaaaatggaattttcagacgtttttcacatgtatcc
acagcatatgtagccggtaaacgtgaagggctcatagttgaagatccttaccctgaaaat
atttcaaaagaacatcctaagggaaaaggatctcatcatgagaataatccagaaaaacct
ctggcaaataatggtttcttcagtaactacgaggagagtaaatacgaggccgaaagggtg
gtccgtgaatcaggtgtgccctattctatcttccggccaggaatggtggtgggagattcc
aagaccggtgaaataaaaacattcaacacagtatatgccctgttcaaactttatctaaag
ggcaaactgcgttttattcccactaattcatctctcaccctgaacatggtcccggtggat
tacgtggcccatgccatcagtaatttaagtttcaatcaggaggcagaaggcagaaccttc
catctcaccgcaccccctgatacattaccctccattaaagaactcctgaaccaggtacgg
gtgtgggcccgggaaaaattggatgttaaactcccccaacccgttttcatcccggcagcg
ccccttattcagcgaataaccccatcttcatcacccggatcaggggtcctgaatattcta
ttcaccctggccccttacctggatgagaaacacactttcagccgggaaaataccgagaat
cttctgggcccctttaaactgaaatgggaagaatatttaccccacctcctggaatacgct
gcttatcatggttttttccatcgttcggaacgcactgtccatgaacaggttctctatcgc
ctgggagggcgcagttatcctgtgaaatattatgatatcaccgtagagggtatccaggag
aaacctgcactccaggtgcgtgaagatatcatttccgcttatcattcacttaaagagtct
ggtgttggtccgggggatcgggtggccctggtgggtttaaacagcacccgttacctgacc
ctggacgtggctatcggattagcaggggcagttagcgtacccctctactacaccagtcca
cccattgaaataaaaaacattttaaaagccagtgaagctaaattactgtttattggtact
cctcatcttatgaaacgcctgtcagaactggatctggacctggaaatcatctccttctgc
cgggaatcacagcccatccccgggagtattatgtcctggtcacagttcctggaaaagggt
aaggaccgggaaacgggtgaaaaaagtacagtatttccccagtcaccagtggattttgat
gacctggccaccatccgttacacctcgggtactacgggaacacccaagggtgttaccttc
aaccagggccatatgaggtggatggccgaggccatggcttcactgcctccctgggaggac
cggaaccgtgaagtacgttacctctcatttttacccatgaaccatgtggtggagggcata
ctggggacctattccccttattatgctccggctcccctgaagatatacttcctggaggac
tttaaccaactggcttccgcactccccctggcaaaacccaccatattcttctccgtacca
cgtttttatgagaagttatggtcccagttgaaggaatccttcctggggaaccattacgct
catctaaaacctggaatactgaaaaaaatacttaaaccattggtgcacagggtattcctg
agtaaagcgggcctggaccgctgctcccagctaatagtgggctcggccacttccagccag
cacctgatccaggattaccatgaactgggagtggagatccacaatgcctacggtttgacc
gaagcccccctggttaccctgaaccggaggggagccaaccggataggtactgtgggtgaa
cccttaccccaaacccatttgcgaatagctggagacggggaagtcatggttaagggcccc
caggtcaccccgggctactttgaatcggatataacccctccaaagaaggagggttggctt
ttaactggggatactggatttgtaaccccagagggtagtctggttataaccggacggaag
aaagaacttataataaattcttacggtaagagtatcgatccccttcgtattgaggcattg
cttcgtgatgccccgggaaccaatgaggtgatgctggtgggtgagggtaaaccctacctc
attggtcttttctgggtggaagaagaacaccatccccacgatatagaggaaaccatccac
cgcgtcaaccaggatctttcccgaccagaacaggttaaaagatgggccttactccccaat
gacctttccattgatggaggggaactcaccgccaacatgaaacttaaaagggagataatc
acccagcgctaccaggatgtgattgattccctctaccagaaaacatctcaccccctcatc
ctgcaccagggccaggtggaggaaggatga
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