Methanobacterium formicicum DSM1535: DSM1535_1197
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Entry
DSM1535_1197 CDS
T03743
Symbol
pcn
Name
(GenBank) DNA polymerase sliding clamp
KO
K04802
proliferating cell nuclear antigen
Organism
mfi
Methanobacterium formicicum DSM1535
Pathway
mfi03030
DNA replication
mfi03410
Base excision repair
mfi03420
Nucleotide excision repair
mfi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSM1535_1197 (pcn)
03410 Base excision repair
DSM1535_1197 (pcn)
03420 Nucleotide excision repair
DSM1535_1197 (pcn)
03430 Mismatch repair
DSM1535_1197 (pcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfi03032
]
DSM1535_1197 (pcn)
03400 DNA repair and recombination proteins [BR:
mfi03400
]
DSM1535_1197 (pcn)
DNA replication proteins [BR:
mfi03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
DSM1535_1197 (pcn)
DNA repair and recombination proteins [BR:
mfi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DSM1535_1197 (pcn)
MMR (mismatch excision repair)
Other MMR factors
DSM1535_1197 (pcn)
TLS (translesion DNA synthesis) factors
Other TLS factors
DSM1535_1197 (pcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_N
Rad9
PCNA_C
Rad1
Hus1
Motif
Other DBs
NCBI-ProteinID:
CEA13534
UniProt:
A0A089ZJ55
LinkDB
All DBs
Position
1:complement(1159640..1160374)
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AA seq
244 aa
AA seq
DB search
MFKAVLSDSNILKTSFDAISSIVDEVQMMADEEGLRLDALDRSHITFVHLELKKGVFDEY
QCDETLKINVDTEELMKVLKRAKAEDMVELTVDEGNLIVTFEGEAKRKFKIRLIDIEYEA
PSPPELEYPTEFEVPFSLLKDSIQDIGIVSDKISLQVNEEKFQASAEGEFGDAKVEYVHG
ERIEESARSIFSLEKVKEMLKADKFSESAVIRLGNDMPLNLALKMASDEGELSFLLAPRI
ESEE
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaggcagttttaagtgattccaatattttgaagaccagttttgatgccatatca
tccattgtcgatgaagtgcagatgatggccgatgaagaaggcttacgtctggatgctctg
gaccgcagtcacattacattcgttcacctggaacttaagaagggagtgtttgacgaatac
cagtgtgacgaaaccctgaagatcaacgtggatactgaagaactgatgaaggttcttaaa
agggccaaagcagaagacatggtggaacttactgtggatgagggtaaccttatagtaaca
tttgagggtgaagccaagagaaaattcaaaatacgtcttatagacatagaatatgaggca
cctagccctccagaattagaatatcctactgaatttgaagtgcctttctccctccttaag
gactccatccaggacataggcattgtctcggataaaatatctctccaggtgaatgaagaa
aaattccaggcttcagcagagggagagtttggtgatgctaaagtggaatatgtccacgga
gaaagaatagaagaatctgctagatcaatattttccctagaaaaagtaaaagaaatgtta
aaagcagataaattctcagaatctgcagttataaggctaggaaatgacatgcccctgaac
cttgccctgaaaatggcttctgatgaaggtgaactgagtttcctacttgccccaaggata
gaaagtgaggaatag
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integrated database retrieval system