Methanobacterium formicicum DSM1535: DSM1535_1206
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Entry
DSM1535_1206 CDS
T03743
Symbol
srp54
Name
(GenBank) Signal recognition particle 54 kDa protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
mfi
Methanobacterium formicicum DSM1535
Pathway
mfi02024
Quorum sensing
mfi03060
Protein export
mfi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
mfi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
DSM1535_1206 (srp54)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
DSM1535_1206 (srp54)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSM1535_1206 (srp54)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
mfi02044
]
DSM1535_1206 (srp54)
Enzymes [BR:
mfi01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
DSM1535_1206 (srp54)
Secretion system [BR:
mfi02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
DSM1535_1206 (srp54)
Eukaryotic Sec-SRP protein
DSM1535_1206 (srp54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
cobW
AAA_16
Zeta_toxin
G-alpha
ATP_bind_1
DO-GTPase2
AAA_18
AAA_33
AAA_28
AAA_30
Arf
MMR_HSR1
AAA_17
ResIII
CbiA
AAA_7
AAA_19
nSTAND3
MobB
Glyco_transf_4
APS_kinase
NPHP3_N
6PF2K
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
CEA13543
UniProt:
A0A090I333
LinkDB
All DBs
Position
1:1166348..1167676
Genome browser
AA seq
442 aa
AA seq
DB search
MLGNLGKNLTKTMKKLAGMTIIDEEVVKEVIKDIQRALIQSDVNIKLVLNLSKTIEDRAL
NEEPPKGVTAKEHVIKIVYDELVNLLGEKAEEVEIEKKPYKILFVGLQGSGKTTSIGKMA
RYLQKKGFNPAIICTDTWRPAAYEQLRQLTESLNLPLYGDPDNKDALDLARKGLKEFKRQ
DLIIVDTAGRHKEEKDLLDEMEQISAVVEPDEVMLVIDGTIGQQAREQALAFSQTTKIGS
IVITKLDGSAKGGGALSAVAEIGAPIKFIGTGERIEDLEVFDPERFISRLLGMGDIRTLI
ERAEEIEEDVDQEAMDAMLSGKFTLKDMYSQFEMMNKMGPMQQVMNMLPGMGNKLPKNAS
QVTEEKLGKYKILMDSMTEEELTHPEIIKQSRVKRIARGSGMRNEDVKELLKYYQVTKKA
IKGFGKRKMGGPLGQMMRQMMR
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgttgggcaatctggggaaaaatctgaccaaaaccatgaaaaaactggccggaatgacc
attatcgatgaagaagtggttaaagaggtcattaaagatattcaaagggctttaattcag
tctgatgttaatattaaactggttctgaatttatccaaaacaattgaagaccgggccctt
aacgaagaaccccctaaaggggtaaccgccaaagaacacgtcattaaaattgtttacgat
gaactggttaatcttttaggtgaaaaagcagaagaagttgaaattgaaaagaaaccctac
aaaatactctttgtagggctccagggaagcgggaaaactaccagtattggtaaaatggcc
cggtacctccaaaaaaagggattcaatccagccataatctgtaccgacacctggaggcca
gcagcctacgaacagctacgtcaactaacagaaagtctcaatttacccctctacggagac
cctgacaataaagatgcccttgatctagcccggaaaggtttgaaagagttcaaaagacag
gaccttatcattgtggacactgcggggcgacataaagaggaaaaagatcttttagatgag
atggagcagatatcagccgtggtagaaccggatgaagtgatgctggtcattgatggtacc
attgggcagcaagcccgggagcaagccctggccttttcccaaaccaccaaaattggatcc
attgtaataaccaaactggacgggtcagccaagggaggaggtgccctttcagcagtagcg
gagataggagctcccataaagttcattggaactggtgagcgtatcgaagatctggaagtc
tttgacccggaacgtttcatatcccgtttactgggaatgggagacatcagaactcttatt
gaacgtgccgaggaaatcgaagaagatgtggaccaagaagccatggacgccatgctcagt
ggtaaattcaccctgaaggacatgtacagccagttcgagatgatgaataaaatgggaccc
atgcagcaggtgatgaacatgctccccggcatgggaaataagttacccaaaaacgcttcc
caggtcactgaggagaaactgggtaagtacaagatactgatggactccatgactgaagaa
gaactcacccaccccgaaatcatcaaacagtcccgggttaaaagaattgcccggggttcg
ggaatgcgtaacgaggatgttaaggagcttttaaaatattaccaggtcactaaaaaggcc
attaaaggctttggaaagcgaaaaatgggagggccactgggccagatgatgcgtcagatg
atgcgttaa
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