Methanobacterium formicicum DSM1535: DSM1535_1313
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Entry
DSM1535_1313 CDS
T03743
Symbol
polB
Name
(GenBank) DNA polymerase II small subunit
KO
K02323
DNA polymerase II small subunit [EC:
2.7.7.7
]
Organism
mfi
Methanobacterium formicicum DSM1535
Pathway
mfi03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
mfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSM1535_1313 (polB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfi03032
]
DSM1535_1313 (polB)
Enzymes [BR:
mfi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DSM1535_1313 (polB)
DNA replication proteins [BR:
mfi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
DSM1535_1313 (polB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Metallophos
Metallophos_2
tRNA_anti-codon
CheR
RuvC
Peptidase_M23
tRNA_anti-like
CHDCT2
Motif
Other DBs
NCBI-ProteinID:
CEA13649
UniProt:
A0A090I3K5
LinkDB
All DBs
Position
1:1291043..1292506
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AA seq
487 aa
AA seq
DB search
MTDNIINKFVDAEILLDESAYKKIKNYNDSAYLVDSLIKHMTTSSPEMMVLTGKVVEDYL
ERTSPDILKTTYHNDSKSQMKLVPQDYDFQILKDASNKSYTNGEIRDLSSYFRSRYHKLR
DLLTYKRELKDSTSIKEAMSRDDVVNIVGMVNDIRYTKNNHKLIEVEDETGSATVLIHNE
NHEVFEHAERIVKDEVIGVLGSRKGTLVMANEIVNPGVPRIDEKPMDFATVFISDIHIGS
STFLDGAFKRFIDWINGDFGDEQQREIANNVKYVVVAGDIVDGIGVYPHQDKELTIKDIH
EQYEEAARYFGDIPNVKIVVAPGNHDASRLAEPQPAIPEDYAKGLYELKNLEFVSNPAMV
SLDGIKVLIYHGRSFDDMAMTVKGMSHQQSDLIMKELLEKRHLAPIYGERTPLASEIEDH
LVIEEIPDVLHTGHVHINSYKRHKGVHLINSGTFQSQTEFQKIYNIVPTCAQVPVINNGS
FKMLDFS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgactgataatataataaataaatttgttgatgcggaaatattgctagatgagtcagct
tacaaaaagataaaaaattacaatgactccgcttacctagtggactctttaatcaaacac
atgaccacttcttcaccggaaatgatggttctcaccgggaaagtagtggaagattacttg
gaacgaaccagtcctgatattctgaaaaccacctaccataatgattccaaatcccaaatg
aaactggtcccccaggactatgatttccagattttgaaagatgccagtaacaagtcctac
accaacggggaaatcagggatctttccagttatttccggagcaggtatcataaattaagg
gatctattaacttacaaacgagaactcaaagatagtacttctattaaagaggctatgagt
cgtgatgatgtggttaacattgtggggatggttaatgatatacgttacactaaaaacaac
cataaactcattgaagtggaagatgaaactggtagtgctaccgtacttattcacaatgag
aatcatgaagtctttgaacatgccgaaagaatagttaaagatgaagtaattggtgtgctg
ggtagtagaaaaggaactctggttatggccaacgaaatagtaaatcctggagtgccccgt
atcgatgagaaacccatggattttgccacggtattcatcagcgatatacatattggaagc
tccacattccttgacggtgcttttaaacgattcattgattggataaatggagattttggc
gatgaacaacagcgggaaatagcaaacaacgtgaaatatgtggtggttgccggagatata
gtggacggaattggtgtttaccctcatcaggataaagagttaaccataaaggacatccat
gaacagtatgaagaagcagctcgatactttggggatatccccaatgttaaaatagtagta
gcccctggaaaccacgatgccagtcgtctggcagaaccacaaccagcaatacctgaagat
tatgctaagggcctttatgaactgaaaaatttggaattcgtaagtaatccggccatggta
agcttggatgggattaaagtgctaatataccacggccgtagcttcgatgatatggccatg
acagttaaagggatgagtcaccagcaatctgatctcatcatgaaagaactcctggaaaaa
cggcatttagcacccatatatggggagagaactccattagcctctgaaattgaggaccat
ttggttattgaagaaattcccgatgttttacacaccggacacgtgcatattaacagttac
aaaaggcacaaaggagtgcatcttataaacagtggaactttccagtctcaaaccgagttt
cagaagatatacaacatcgtgcccacctgtgctcaggttccagtgataaacaacggcagc
tttaaaatgctggatttcagctaa
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