KEGG   Methanobacterium formicicum DSM1535: DSM1535_1780
Entry
DSM1535_1780      CDS       T03743                                 
Name
(GenBank) metal dependent phosphohydrolase
  KO
K03698  3'-5' exoribonuclease [EC:3.1.-.-]
Organism
mfi  Methanobacterium formicicum DSM1535
Brite
KEGG Orthology (KO) [BR:mfi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mfi03019]
    DSM1535_1780
Messenger RNA biogenesis [BR:mfi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DSM1535_1780
SSDB
Motif
Pfam: HD tRNA_anti-codon TraI_2 HDOD Cas3_HD Gluconate_2-dh3 AAA_23
Other DBs
NCBI-ProteinID: CEA14105
UniProt: A0A090I7D4
LinkDB
Position
1:1784301..1785206
AA seq 301 aa
MFKEEKDFIENLNSVRRISTSFVIASATVKKARNGKDYLEFSLTDKSGQITARMFPNRNA
HEIYDTINEKCIYQINGVVDEFPRNSQNFSIKIDDLQALEEDNYQLDDFIRTSSKDREEL
LDEIKNTVEEMENIYLKNLLNSFFTDPEFTQEFCTAPSAKVYHHNYVGGLLEHSVEVLQI
CRTMCHIFPQLDQDLLYTGAILHDVGKLKAYDYDLISIDISNEGKLLDHLFISAEMVKEK
INILDMDMPEELQTQVLHLILSHHGAVRNGWGSPVDPKTPEAIALHHADDLDAKVKGSIQ
K
NT seq 906 nt   +upstreamnt  +downstreamnt
atgtttaaagaggaaaaagatttcattgaaaacttgaacagtgttagaagaatcagtacc
tcatttgttatagccagtgccacagtcaaaaaggcgcgcaacggtaaagactaccttgaa
tttagtttaactgataaaagtggtcagataacggcgcgaatgtttcccaaccgcaatgcc
catgagatctacgatacaattaatgagaaatgcatttaccagataaatggagtggtagat
gagtttccccgtaactcccagaatttcagcataaaaattgatgatctgcaggccctggaa
gaagataattaccagctggatgatttcatccgaacatccagtaaagaccgggaagaactt
ctagatgagattaaaaacacggtggaagaaatggaaaacatctatcttaagaatctactt
aattcctttttcactgaccccgaatttacccaggaattttgcaccgcaccttcggcaaaa
gtttaccaccacaactatgtagggggtttactggagcacagtgtagaagtactgcaaata
tgcagaactatgtgccatatattccctcagctggaccaggatctcttatataccggggca
atactccatgacgtgggtaaattaaaggcctatgactatgatctcatcagtattgacatc
tccaacgagggaaaactattggatcatctattcatctctgcagaaatggttaaagagaag
attaacatcttagatatggatatgccagaagaactacaaacccaagtgttacatctaata
ctgagccatcatggcgctgttcgaaatggatggggctcaccagttgatcccaaaactccc
gaagcaattgccttgcatcatgccgatgatttagatgcaaaggttaagggatcaatccaa
aaataa

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