Methanobacterium formicicum DSM1535: DSM1535_2163
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Entry
DSM1535_2163 CDS
T03743
Name
(GenBank) putative ski2-type helicase
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
mfi
Methanobacterium formicicum DSM1535
Brite
KEGG Orthology (KO) [BR:
mfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfi03400
]
DSM1535_2163
Enzymes [BR:
mfi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSM1535_2163
DNA repair and recombination proteins [BR:
mfi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
DSM1535_2163
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HHH_2
HHH_5
HHH
Helicase_dom4_arc
HTH_61
DEXQc_Suv3
HHH_3
AAA_30
HHH_8
PhoH
AAA_35
5_3_exonuc
DUF4462
Motif
Other DBs
NCBI-ProteinID:
CEA14485
UniProt:
A0A090I875
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All DBs
Position
1:2181531..2183612
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AA seq
693 aa
AA seq
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MSLESLDPAIRKIIKDSYPQIEDLNPAQKAVVEAGLLEEKENFIIAIPTASGKTLLGVMA
ALRTILEGGKVVYTVPLLSIQNEKVKEFKKFEEHGIKVGKHPSSSDLAVMVFESYDALTR
FNWNTLSEVDLVIVDEFHMIGEYSRGPTIECAITRSRIINPGMRLIALSATLQNMEELST
WLGARVVEHDYRPVPLYQEVLNTEEYGTKNKNDVILRILKDSMEESSQALVFVSTRRFTE
SLANYLAGKIKRNLPAEKKKTFKMVAEKILDVPRRRGSLPTEVCLKLAECVENGMAFHHA
GLFDRQKEIIEEEFRAGNLLMITATPSLMYGVNLPSKNVVIRDYTRWTSQGPQPIPVFDY
LQMSGRAGRPGYDKEGYSYLIGKTLSEAEQLQYQYVYGEIEATNSKLLENRDAVYRQIIS
QVAAGMARNLDELMEFFQGTFSGFQMTHSEYSSLFASDTIQFQVKEALDFLTEHGMIQVV
PDGLRATAFGMLIAKSNYAVQTAVRLKEFARSGGEVDMSRLVYEICRTPDLIPISFKGRK
SRDPVRDRLNQAGLFVVDVGNDEATAATLMEWMDERSEYEIENAFHVYAASTRRAAYEAS
QLVKFHREICQVLGIYTGLDSMEVLAARLYYGVKEELLPLVVGIKRLGRRRARALVDAFG
TDLRYVSREELLRIEGIGPKTAENILKKYHTRD
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttgaatcactggatcctgccatcagaaaaataatcaaggattcttaccctcag
attgaggatttgaaccctgcccagaaggctgtggtggaagcgggcttactggaggagaag
gaaaacttcatcattgccatacccacggccagtggaaaaaccctcctgggagtaatggct
gccctccgaaccatccttgagggcggtaaagtagtttacactgtccccctattatccatt
cagaatgaaaaggttaaggaatttaaaaaattcgaagaacacggtatcaaggtgggtaaa
cacccctcttcctcagacctggcagtgatggtgtttgaatcctacgatgccctgacccgt
ttcaactggaacaccctttcggaggtagatctggtaattgtggatgagtttcacatgatc
ggggagtacagtcgtggccccaccattgaatgtgccatcacccgttcccgtataatcaac
ccggggatgaggttgatcgccctatccgccaccctacagaacatggaggaactctccacc
tggctgggtgcccgggtggtggaacacgactaccgaccagtacccctctaccaggaagtg
cttaacactgaagaatatggtactaaaaataagaacgatgttattctccgtatcctgaag
gattccatggaggaatccagccaggccctggtctttgtctccacccgtcggttcactgaa
tccctggccaactacctggccggtaagatcaaaaggaacctgcctgccgagaagaaaaag
accttcaaaatggtggcggagaagatcctggatgtgccccgccggaggggatccctgccc
accgaggtgtgccttaaactggcggagtgtgtggaaaatgggatggccttccaccatgcc
ggactttttgaccggcagaaggagatcattgaggaagaattccgtgccggtaaccttctg
atgatcaccgccacccccagcttaatgtacggggtgaacctcccctctaaaaatgtggtt
atccgggattacacccgttggacaagtcagggccctcaaccaataccggtgtttgattac
ctgcagatgtctggtcgggccgggcgtccaggatatgataaggagggttactcctatttg
attggtaaaaccctgtctgaagccgagcaactccagtaccagtatgtctacggggaaatt
gaggccaccaattccaagttactggagaaccgggatgcggtgtaccggcagatcatatcc
caggtggcagccgggatggctcgaaacctggatgagcttatggagtttttccagggaaca
ttttccggtttccagatgactcactccgaatattcatctttatttgcctcggacaccatc
cagttccaagttaaagaggcactggattttctcactgaacacggcatgatccaggtagtt
ccagatggattaagagccactgcctttggaatgttaattgccaagagtaactatgcagtg
cagactgcggtgcgtcttaaggaatttgcccgttctggtggggaggtggacatgtcccgt
ctggtgtacgagatatgccgcaccccggatctcatccctatctcatttaagggccgcaag
agccgtgaccccgtccgggatcggcttaaccaggccggactctttgtggttgatgtgggt
aatgatgaagccactgccgccacccttatggagtggatggatgaacgtagcgagtacgaa
attgaaaatgctttccatgtatacgctgcctcaacccgcagggcagcctacgaggcatca
cagctggtgaagttccaccgggagatatgccaggttctgggaatatacactggactggat
tccatggaagtgctggctgctcgactctactacggtgtgaaagaggagttactccccctg
gtagtggggatcaaacgtctgggccgtagaagggccagagcactggttgatgcctttgga
acggatctccgctatgtatcccgtgaggaactcctgcgaattgagggtattggccctaaa
acagccgaaaacatcctgaaaaagtaccatacccgggattga
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