Methanobacterium formicicum DSM1535: DSM1535_2437
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Entry
DSM1535_2437 CDS
T03743
Symbol
carB
Name
(GenBank) Carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
mfi
Methanobacterium formicicum DSM1535
Pathway
mfi00220
Arginine biosynthesis
mfi00240
Pyrimidine metabolism
mfi00250
Alanine, aspartate and glutamate metabolism
mfi01100
Metabolic pathways
mfi01110
Biosynthesis of secondary metabolites
mfi01240
Biosynthesis of cofactors
Module
mfi_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
mfi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
DSM1535_2437 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
DSM1535_2437 (carB)
00220 Arginine biosynthesis
DSM1535_2437 (carB)
Enzymes [BR:
mfi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
DSM1535_2437 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
GARS_A
RimK
ATP-grasp_3
ATP-grasp_5
ATP-grasp_2
Epimerase
Motif
Other DBs
NCBI-ProteinID:
CEA14905
UniProt:
A0A090I571
LinkDB
All DBs
Position
1:2455929..2459114
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AA seq
1061 aa
AA seq
DB search
MPRDKDINKVLIIGSGPIQIGQAAEFDYSGSQACKSLQEEGIETVLVNSNPATIQTDVDM
ADSVYVEPLTPEIVAKIIAKEKPDAVLPTMGGQTGLNVATGLEEIGALEGIKVIGSSVQT
IKNVEDRDLFDHFMKKLNEPVPKARAVSSLEEALEAVEKIGYPVIVRPAFTLGGTGGGVA
HNRQELEEVASRGLDMSYINQVLIDQSVMGWKEFEYEVMRDKNDTCIIVCNMENMDPMGI
HTGESIVVAPSQTLSDVDNQRLRNASIKIIRALEIQGGCNIQFAVHPVTGEYKVIEVNPR
VSRSSALASKATGYPIAKISSKIAVGMTLDEIQNDITKETPASFEPSLDYIVTKIPRWPF
DKFKGISREIGVQMKSTGEVMAIGRTLEESLHKAIRSLDVGSFGFDETEFNEEKLKTATD
ERLFQIYSALKSGMTVNEILDITQIDPFFLHKILNIVEWEKEITADTILEASVMRKTKRM
GFSDRKISQITGLDEEVIRKTRIELGITPSYKMVDTCAAEFEAKTPYYYGCYEEEDEVTV
SDNKKVVIIGAGPIRIGQGIEFDYCCVHAAMALKDTGIETIIINNNPETVSTDYDISSKL
YFEPLTLEDVLGVIRKEKPYGVVVQFGGQTSINLAVPLAQEGVRILGTPYESIDRVEDRE
RFTEVLNKLEIPQADYGIAHSFEDARKVAERIGFPVLVRPSYVLGGRAMQIVYDDDELRE
YMKEAVRISPEHPILVDKFLEDAIEIDVDALSDGEEVFIGGIMEHIEEAGVHSGDSACVI
PPQSLPLDILEIIKDYTTKLALELDVVGLMNIQYAFKTDENGKSKVYILEANPRASRTVP
FVSKAVGVPLAKIAAELMMGKKLKDFGLNHEVKINHVAVKESIFPFIKLPEADSVLGPEM
KSTGESMGIDENFGVSYYKAQLSAGMDLPQKGTLFISVRDADKDKISDIVKKAEELGFKL
VATRGTAVAVQDEVDIDIIRKVSQGSPNIRDAILNKEVSMIINTPSGKQSADDGYFIRRM
AVELGIPYVTTLAGARAALNAIENVEKGKIGVKSLNEYHNL
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgccgagggacaaagatattaacaaggtactaatcattggatcaggacccatacagatt
ggtcaagccgctgaatttgattattcaggttctcaagcctgtaaatcccttcaagaagag
ggtattgagactgtgctggtgaacagcaaccccgctaccattcaaaccgatgtggatatg
gctgattccgtatatgtggaaccattgactcctgaaattgtagccaagatcattgccaaa
gaaaaaccagatgccgtcttacccaccatggggggacagaccggtttaaatgtagccacg
ggactggaagaaataggtgccctagaaggaattaaggtaatcggatcatcagtccagacc
attaaaaatgtggaagaccgtgatctctttgatcatttcatgaaaaaactcaatgaacct
gtccccaaagcaagggcagtatcctctctagaagaagcattggaagctgttgaaaaaata
ggatatccggttattgtccggcccgccttcaccctgggtggaactggaggtggagtggct
cacaatcgtcaggaactggaagaagtggccagtaggggattggatatgagctatataaat
caggtgcttattgaccagtcagtgatggggtggaaggaatttgaatatgaggttatgcgg
gataaaaacgatacctgtatcattgtctgtaacatggagaacatggaccccatgggaata
cacaccggggaaagtatcgtggtggctccttcacagaccttatctgatgtggacaaccag
cgcctgaggaatgcctccatcaagatcatacgtgccctggaaatacagggcggttgtaac
atacagtttgcagtacatcctgtaaccggagaatacaaggttattgaagtgaacccccgg
gtgagtaggagcagtgctctggcttccaaggccactggatatcccattgccaagatttcc
tccaagatcgccgtgggaatgaccctggatgaaattcaaaacgatatcaccaaggaaaca
ccggcatcattcgaacccagcctggactacattgtaaccaaaataccacgctggcccttt
gacaaattcaagggtatcagccgggaaataggagtgcagatgaaatccaccggtgaagtc
atggccattgggcgcaccctggaggaatccctgcacaaagctatccgcagcctggatgtg
ggaagctttggatttgacgaaactgaatttaatgaagaaaaacttaaaaccgccactgac
gaacgtttattccagatttacagcgcattaaaatcgggaatgaccgtgaatgagatactg
gacataacccagatcgatcccttcttcctccataaaatactgaatatagtggagtgggag
aaagagatcacagctgataccattcttgaggcatctgtaatgcgtaaaactaaaagaatg
ggtttttcagaccgtaaaatatcccagatcaccggtttagatgaagaggtaattagaaaa
acccggatagaactgggaataactccttcctataaaatggtggacacctgcgctgcagag
tttgaagccaaaaccccttattattatggttgttatgaagaagaagatgaagtaactgtt
tctgataataaaaaagttgtgataataggtgccggacccatcaggattggacagggtatt
gagtttgactactgctgtgttcatgctgcaatggctcttaaagacactggtattgagacc
attatcattaacaataacccggaaacggtcagtactgactacgacatatccagcaaactc
tactttgaaccactcaccctggaagatgttttaggggtgatccgtaaagaaaaaccctac
ggagtagtggtgcagtttggaggccagacctccattaacctggctgtgcccctggcccag
gagggagtgcgcatactgggaacaccttacgaaagcatagaccgggttgaagaccgggaa
aggttcactgaagttttaaataaactggaaatacctcaggcagattatggaattgcccat
tcgtttgaagatgctcgtaaggtagcggaaagaattggtttcccggtactggtacgaccc
tcctatgtactggggggccgggccatgcagatcgtctacgatgatgatgaactccgggag
tacatgaaggaagcagtgcgcatatcaccggagcaccctatactggtggataaattcctg
gaagatgccattgaaatagatgtggacgccctctctgatggagaagaagtattcattgga
gggataatggaacacattgaagaagccggtgtccactccggagactccgcctgcgtcata
cctccacagagtcttcctcttgatatactggaaattattaaggattacaccactaaacta
gcactggaactggatgtggtgggattgatgaacatccagtatgcatttaaaactgatgaa
aatggcaaatccaaggtttatattctggaagctaaccccagggccagccgaaccgttcct
tttgtaagtaaagctgtgggtgtgcctttggctaagatcgctgctgaactgatgatgggc
aaaaaactcaaagacttcggtttaaaccatgaagttaaaatcaaccatgtagcagtgaaa
gaatccatcttccccttcataaaactacccgaagcagactctgtgctgggaccggagatg
aaatccactggggagagtatgggaattgatgagaactttggagtatcatactacaaggct
caactctccgcgggtatggaccttcctcaaaaaggaacccttttcataagtgtgcgggat
gcggacaaggacaaaatttcagatattgtgaaaaaagcagaagaacttggttttaaactt
gtagccaccagaggtactgcagtggcagtccaggacgaagttgacattgacattatacgt
aaagtcagtcagggatcacccaatatccgtgatgccatcctcaacaaggaagtttccatg
atcatcaacaccccctccggtaaacaatcagcggatgatggatacttcatccgtagaatg
gcagttgaactgggaataccctacgtcaccaccctggccggagcaagagcagctttaaat
gctattgaaaatgtggaaaaagggaaaatcggagttaaatcactgaacgaataccataac
ctctga
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