Methanobacterium formicicum DSM1535: DSM1535_2455
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Entry
DSM1535_2455 CDS
T03743
Name
(GenBank) NusG antitermination factor
KO
K15172
transcription elongation factor SPT5
Organism
mfi
Methanobacterium formicicum DSM1535
Brite
KEGG Orthology (KO) [BR:
mfi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
DSM1535_2455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfi03021
]
DSM1535_2455
03019 Messenger RNA biogenesis [BR:
mfi03019
]
DSM1535_2455
Transcription machinery [BR:
mfi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
DSM1535_2455
RNA polymerase I system
DSM1535_2455
Messenger RNA biogenesis [BR:
mfi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
DSM1535_2455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
KOW1_SPT5
DUF411
KOW4_SPT5
Motif
Other DBs
NCBI-ProteinID:
CEA14939
UniProt:
A0A089ZCU1
LinkDB
All DBs
Position
1:2474345..2474788
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AA seq
147 aa
AA seq
DB search
MIYAIRTLVGQEKNVARIIARNVKDSGIGVSAVLVPESLRGYILVESSTKIDLQNPAFKV
PHMKGAIEGDIPYDEIKSFLKPEPIIASIQKGSIVELISGPFKGEKAKVVRIDESREDVV
LELIEAAVPIPVTVKGDQIRLIQKEAD
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
ttgatctatgcaataagaaccctggttggccaggaaaaaaacgtggccaggataatagcc
aggaatgttaaagatagtgggattggagttagtgccgtgctggttccagagagtttacgt
ggatatatactcgtagagtcatccacaaagattgatctgcaaaacccggcattcaaggtg
ccgcatatgaaaggagccatagaaggagacatcccctatgatgagataaaaagcttttta
aagccggaaccaataatagcttccatacagaagggaagtattgtggaactgatatccgga
ccattcaaaggcgaaaaagccaaagtggttcgtattgatgaatccagagaagatgtggtt
ctggaacttattgaagcagcagttcctatccccgttactgttaaaggtgatcagattaga
ttaatacagaaggaggcagattaa
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