Mycobacterium florentinum: MFLOJ_10340
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Entry
MFLOJ_10340 CDS
T06524
Symbol
dnaE1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mfj
Mycobacterium florentinum
Pathway
mfj03030
DNA replication
mfj03430
Mismatch repair
mfj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MFLOJ_10340 (dnaE1)
03430 Mismatch repair
MFLOJ_10340 (dnaE1)
03440 Homologous recombination
MFLOJ_10340 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfj03032
]
MFLOJ_10340 (dnaE1)
03400 DNA repair and recombination proteins [BR:
mfj03400
]
MFLOJ_10340 (dnaE1)
Enzymes [BR:
mfj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MFLOJ_10340 (dnaE1)
DNA replication proteins [BR:
mfj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MFLOJ_10340 (dnaE1)
DNA repair and recombination proteins [BR:
mfj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MFLOJ_10340 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
BBX77247
LinkDB
All DBs
Position
complement(1076339..1079872)
Genome browser
AA seq
1177 aa
AA seq
DB search
MNQSSFVHLHNHTEYSMLDGAAKITPMLAEVERLQMPAVGMTDHGNMFGASEFYNAATKV
GIKPIIGVEAYIAPGSRFDTKRILWGDPGQKSDDVSGSGSYTHMTMVAESATGLRNLFKL
SSLASFEGQLGKWSRMDAELIAEHAEGIIATTGCPSGEVQTRLRLGHDREALEAAAKWRE
IFGADNFFLELMDHGLSIETRVRDGLLEIGRKLGIPPLATNDCHYVTRDAAHNHEALLCV
QTGKTLSDPNRFKFDGDGYYLKSAAEMRKLWDDQVPGACDSTLLIAERVQSYAEVWAPRD
RMPVFPVPEGHDQATWLHHEVMAGLQRRFPSGVGQEYIERAEYEIKVICDKGFPAYFLIV
ADLINHAKSIDIRVGPGRGSAAGSLVAWALGITNIDPIPHGLLFERFLNPERPSAPDIDI
DFDDRRRGEMVRYAADKWGSDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKA
LPPAIMAKDIPLVGITDPAHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHA
CAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDALENI
KANRGIDLDLESVPLDDKPTYELLGRGDTLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLA
LYRPGPMGMNAHNDYADRKNARQAIKPIHPELEEPLREILSETYGLIVYQEQIMFIAQKV
ASYTMGKADALRKAMGKKKLEVLEAEYQGFKEGMTANGFSEKAVKALWDTILPFAGYAFN
KSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVN
ESLVNFASVGKDIRFGLGAVRNVGANVVGSLIKTRSEKSKFTDFSDYLNKIDISACNKKV
TESLIKAGAFDSLGHARKGLFLVHTDAVDSVLGTKKAEAMGQYDLFGGGDAGGDTVFTIR
VPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLSAQVDTQIPAILDGDVNNETQVRVG
GILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHAYSAYGADIVDDAVVLVNAKVAIR
DDRITLIANELVVPDFSNAQPNRPIAVSLPTRQCTIDKVSALKQVLARHPGTSQVHLRLI
SGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLGS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagtcctccttcgtgcacctgcataaccacaccgagtattcgatgctcgatggt
gccgcgaagatcacgccgatgctcgccgaggtagagcggcttcagatgcccgcggtcggc
atgaccgaccacggaaacatgttcggcgccagcgagttctacaacgcggcgaccaaggtc
gggatcaagccgatcatcggcgtcgaggcctacatcgcgccgggctcgcgcttcgacacc
aagcggattctttggggcgaccccggccagaagtccgacgacgtctcgggtagcggctcc
tacacgcacatgacgatggtggccgaaagcgccaccgggttgcgcaacctgttcaagctg
tcgtcgctggcctcgttcgagggccagctgggcaagtggtcgcgcatggacgccgagctg
atcgccgaacacgccgagggcatcatcgccaccaccgggtgcccgtcgggggaggtgcag
acccgtcttcggctggggcacgaccgcgaggcgctggaagcggccgccaagtggcgcgag
atcttcggtgccgacaacttcttcctggagctgatggaccacgggctgtccatcgagacg
cgggtccgcgacggcctgctcgagatcggccgcaagctcgggatcccgccgctggccacc
aacgactgccactacgtcacccgcgacgccgcgcacaaccacgaggcgctgttgtgtgtg
cagaccggcaagacgctgtcggacccgaatcggttcaagttcgacggtgacggctactac
ctcaagtcggccgccgagatgcgcaagctctgggacgaccaggtgccgggggcctgcgac
tcgaccctgctgatcgccgagcgggtgcagtcctacgccgaggtgtgggcgccacgcgac
cggatgccggtcttcccggtgcccgagggccacgaccaggcgacctggctgcaccacgag
gtgatggcggggctgcagcggcgctttccgtccggtgtgggccaggagtacatcgagcgg
gccgagtacgagatcaaggtcatctgcgacaagggcttcccggcctacttcctgatcgtc
gccgacctgatcaaccacgcgaagtccatcgacatccgggtcgggccggggcgtgggtcg
gcggcgggctcgctggtggcctgggcgctgggcatcaccaacatcgacccgattccgcac
ggcctgctattcgagcggttcctcaacccggaacgtccgtcggcacccgatatcgatatc
gacttcgacgaccgtcgccgcggcgagatggtgcgctacgccgccgacaagtgggggtcg
gaccgcgtcgcgcaggtgatcaccttcggcacgattaaaaccaaagcggcactgaaggat
tcagcgcggatccactacggtcagcccgggtttgccatcgccgaccggatcaccaaggcg
ctgccgccggcgatcatggccaaggacatcccgctggtcggcatcaccgacccggcccac
gagcggtacaaagaagccgccgaggtgcgcggcctgatcgagaccgacccggacgtgcgc
accatctaccagaccgcgcgcggcctggagggcctgatccgcaacgccggcgtgcacgcg
tgtgcggtgatcatgagcagcgagccgctgaccgaggccatcccgctgtggaagcgcccg
caagacggggccatcatcaccggctgggactacccgtcgtgtgaggccatcggcctgctg
aaaatggacttcctgggcctgcgcaacctgacgatcatcggcgacgcgctggaaaacatc
aaggccaacaggggaattgacctcgacctggagtcggtgccactcgacgacaagcccacc
tatgagctgctgggccgcggcgacaccctgggcgtgttccagctcgacggcgggccgatg
cgcgacctgctgcgccggatgcagcccaccgagttcaacgatatcgtcgccgtgctggcg
ctgtaccgtccggggccgatgggcatgaacgcccacaacgactacgccgaccgcaagaac
gcccggcaggcgatcaagccgatccatccggagctcgaggaaccgctgcgcgagatcctt
tccgagacatacggtttgatcgtctaccaagagcaaatcatgttcatcgcccagaaggtc
gcctcctacacgatgggtaaggccgacgcgctgcgcaaggcgatgggtaagaagaagctc
gaggtgctcgaggccgagtaccagggcttcaaagaggggatgacggccaacggcttctcc
gaaaaagcggtgaaagccttgtgggacaccattcttccgttcgccggatacgcgttcaac
aagtcgcacgcggcgggctacggcctggtctcgtactggaccgcctatttgaaggccaac
tacccggccgagtacatggccggcctgttgacatcggtaggcgacgacaaggacaaggcc
gcggtctacctggccgactgccgcaagctcggcatcacggtgctgccgccggacgtcaac
gagtccctggtcaacttcgcgtcggtcggaaaggacatccgcttcggcctgggcgcggtg
cgcaacgtcggcgccaacgtggtgggctcgctgatcaaaacccgaagcgagaaaagcaaa
ttcaccgatttttcggactacctgaacaagatcgacatctccgcgtgcaacaagaaggtc
actgaatcgctgatcaaggccggcgcgttcgattcgctggggcatgcccgcaaggggctg
ttcctggtgcacaccgacgccgtcgactcggtgctgggcaccaagaaggccgaggcgatg
ggccagtacgacctgttcggtggcggcgatgccggcggggacacggtgttcaccatccgg
gtgcccgaggacgagtgggaagacaaacacaagctcgccctggagcgggaaatgctgggg
ctctacgtctccgggcatccgctcaacggggtggcgcacctgctgtccgcacaggtcgac
acccagattccggcgattctcgacggcgacgtcaacaacgagacacaggtgcgggtcggc
ggcatcctcgcctcggtgaaccggcgcgtcaacaagaacggaatgccctgggcgtcagct
caattggaagacctcaccggtggcatcgaggtgatgttcttcccgcacgcgtactccgcc
tacggcgccgacatcgtcgacgacgcggtggtgctggtcaacgccaaggtcgcgatccgc
gacgaccggatcacgctgatcgccaatgagcttgtggtgccggacttttccaatgcccag
ccgaaccggccgattgcggtcagcttgcccacccggcagtgcaccatcgacaaggtgagt
gcgctcaagcaggtgctggcgcggcatccgggcacctcgcaggtgcatctgcggctgatc
agcggcgaccggatcaccacgctggagctcgatcagtcgctgcgtgtgacaccgtcgccg
gcgctgatgggcgacttgaaggaactcctcggcccgggctgcctgggcagctag
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integrated database retrieval system
