Mycobacterium florentinum: MFLOJ_21080
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Entry
MFLOJ_21080 CDS
T06524
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mfj
Mycobacterium florentinum
Pathway
mfj03420
Nucleotide excision repair
mfj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mfj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MFLOJ_21080
03430 Mismatch repair
MFLOJ_21080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfj03400
]
MFLOJ_21080
Enzymes [BR:
mfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MFLOJ_21080
DNA repair and recombination proteins [BR:
mfj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MFLOJ_21080
MMR (mismatch excision repair)
Other MMR factors
MFLOJ_21080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BBX78321
LinkDB
All DBs
Position
complement(2228700..2232029)
Genome browser
AA seq
1109 aa
AA seq
DB search
MTPRYSPDELASALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLIANGY
AEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGTAGTVTLESAGAPAVSTYHAFAGS
LLRDYGLLLSIEPDTRLLSETELWQLAFDVVNGYGGQLSTDKTPAAVTSMVLRLWGQLTE
HLVDTGQLRDTHLELERLVHALPAGPYQRDRGPSQWLLRLLAAQTERTELVPLLDALQER
MRSAKVMDFGVQMASAARLAANFPQVGEDLRNRYRVVLLDEYQDTGHAQRIALSALFGGG
VDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPQSDGTPAPVLELRTSWRNPPSTLH
IANAISAEARRRSVAVHALRPRPDAPPGTVRAALLADAQAEREWIADHLHEHYQRSRDDG
VSPPTAAVLVRRNADAAPVAEALRARGIPVEVVGLAGLLSIPEVAELVAMLRLVADPTAG
AAAMRVLTGPRWRLGGRDIAALWQRAATLGAGRPADASSAQSIAMAAGPSGLGADTACLA
DAIGDPGAANSYSVTGYQRITALAAELSALRGHLGHSLPDLVAEVRRTLGLDCEVRAAAG
HGGWAGAEHLDAFADVVAGYAERTTATDASAAASVLGLLAYLDAAEVVENGLAPAPLTVA
RDRVQVLTVHSAKGLEWEVVAVAHLSGGIFPSTASRSSWLTDAAELPPLLRGDRASAGAL
GIPVLDLSDVTNRKQLSDEISEHRRQLEQRRVDEERRLLYVGITRAEDTLLVSGHHWGPT
GIKPRGPSDFLCELKDVIDRSVAEGNPCGVVEQWAPAPAEGDRNPLRDSAIEAVWPADPL
ARRRPDVERGAALVAGAMAAGATQDCVDVEVDVDGWAADVDALLAERARAERRVVRALPS
QLSVSGLVDLARDPEGAVQRLVHRLPTRPDPHALLGNAFHSWVQQFYGTEWLFELGDLPG
AADSDVGHTGELAVLQQAFTRSQWAARTPIAVEVPFEMPIGDTVVRGRIDAVFAEPDGGA
TVVDWKTGEPPRGAEAMRQAAVQLAVYRLAWAALSGCPESSVRTAFHYVRTGVTVVPDEL
PDLTELAGLAPASGRYPQPDAAGERGVAV
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgaccccgcgctacagcccggacgaattagccagtgcgctagggcttttcccgcccaca
gccgaacaggccgccgtcatcgccgcgccgccgggaccgctcgtcgtgatcgccggtgcg
ggcgcgggcaagaccgagacgatggccgcgcgggtggtgtggctgatcgccaacgggtac
gccgagcccggtcaggtgctgggattgacgttcacccgcaaggcagccggacagctgctg
cgccgggtccgctcccggctggcccggttggccggtatcggcttgggcacggccggcacg
gtgaccctcgaatcggcgggcgccccggcggtcagcacctatcacgcgttcgccggctcg
ctgctgcgggactacggtctgctgctgtcgatcgaacccgacacccgcctgctcagcgag
accgagctgtggcagctggcgttcgacgtggtcaacggctacggcgggcagctgagcacc
gacaagacgccggccgcggtcacctcgatggtgttgcggctgtggggccagctcaccgag
cacctggtcgacaccggccagctccgcgacacccacctggagttagagcggttggtccac
gccctgcccgccggcccctaccaacgcgaccgcggaccgagccaatggttactgcggctg
ctggccgcccagaccgagcgcaccgagctggtaccgctgctggatgccttgcaggagcgg
atgcgcagcgcgaaggtcatggacttcggcgtgcaaatggcctcggcggcaaggcttgcc
gcgaacttcccgcaagtcggggaggacttgcgcaaccgctaccgggtggtcctgctcgac
gagtaccaggacaccggacacgcccagcgcatcgcgttgtcggccctgttcggcggcggc
gtcgacgatgggctggcgctcacggccgtcggcgatccgattcagtcgatctacggctgg
cgcggcgcttcggcaaccaatctgccccggttcaccaccgacttcccgcaatccgacggc
acacccgcgccggtgctggagctgcggaccagctggcgcaacccgcccagcacgctgcac
atcgccaacgccatttcggccgaggcgcgacgccgatccgtggccgtgcatgccctgcgg
ccgcgcccggacgccccgccgggcaccgtccgcgccgcactgctggccgacgcgcaggcc
gagcgcgagtggatcgccgaccacctgcacgagcactaccagcggtcgcgcgatgacggc
gtcagcccgccgaccgccgcggtgctggtgcgccgcaacgccgatgccgcacccgtcgcc
gaggcgctgcgcgcccgcgggatcccggtcgaggtcgtcgggctggccggcctgctgtcc
atcccggaggtcgccgaactggtggccatgctgcgcctggtcgccgaccccacggccggt
gcggcggcgatgcgggtgctgaccgggccacgctggcgactgggcggccgggacatcgcc
gcgctctggcagcgcgcggcgaccctcggtgcggggcgccccgccgacgcatcctcggca
cagtcgatcgcgatggcggccggtccctcaggcttaggggccgacaccgcgtgcctggcc
gacgcgatcggtgatcccggcgcggccaactcgtattcggtcacgggatatcaacgcatc
accgcgctggccgccgagctgagcgcgctgcgcggtcacctcggtcattcgctgcccgac
ctggtcgccgaggtgcgacgcacgctgggcctcgactgcgaagtccgcgcggccgcaggc
catggcggctgggccggcgccgaacacctcgacgccttcgccgacgtggtcgccggatat
gcggagcgcacaaccgcgaccgacgcgtccgccgcggcatccgtcctggggctgctggcc
tacctggacgccgccgaggtcgtcgaaaacggcttggcgcctgcgccgttgacggttgct
cgggaccgggtccaggtgctcaccgtgcactccgcgaagggcctggagtgggaggtcgtc
gcggtggcgcacctgtccggcggaatattcccgtcgaccgcgtcgcgcagcagctggctc
accgacgccgccgaactaccgccgctgctgcgcggggaccgcgcctcggcgggcgcgctg
ggcatcccggtgctggacctctcggacgtcaccaatcgaaagcagctgtcggacgagatc
tccgagcatcgccgccagctggagcagcgccgcgtcgacgaagagcgccggctgttgtat
gtcgggatcactcgggccgaggacacgctgctggtctccggtcatcactggggcccgacc
gggatcaaaccgcgtgggccgtcggacttcctgtgcgaactcaaggacgtcatcgaccga
tcggtcgcggagggtaatccctgcggcgtggtggagcagtgggcccccgcacccgccgaa
ggtgatcggaacccgctgcgcgacagtgcaatcgaagcggtatggcccgccgatccgctg
gcccggcgccgtcccgacgtggaacgcggagcggcgctggtggccggggctatggcggcc
ggcgcgacgcaagactgtgtcgacgtcgaagtcgacgtcgacggctgggctgccgacgtc
gacgcgctgctggccgagcgcgcccgcgccgaacgacgggttgtccgcgctctgcccagc
cagttgtcggtcagcggcctggtggacctggcccgcgaccccgagggtgcggtgcagcgg
ctggtgcatcgcctgccgacccgccccgatccacatgcattgctgggcaacgcctttcac
tcttgggtacaacagttctacggaaccgagtggctgttcgagctgggcgacctgccgggt
gcggccgactccgatgtgggccacaccggggaactggccgtgttgcagcaggcgttcacc
cggtcgcagtgggcggcccgcacacccattgccgtcgaggtcccgttcgagatgccgatc
ggcgacaccgtggtgcgtgggcgcatcgacgccgtcttcgccgaacccgacggtggcgcc
acggtggtggactggaaaacgggcgaacctccgcgcggtgccgaggcgatgcggcaggcc
gccgtccagctcgccgtctaccgcctggcgtgggcggcgttgtccggatgcccggagtcc
tcggtgcggaccgcgttccactacgtgcgcaccggtgtcaccgtcgtccccgacgaacta
cccgatctcaccgagctggccgggctggccccggcgagcgggcggtacccccagcccgac
gccgcgggcgagcgcggtgtcgccgtctga
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