Mycobacterium florentinum: MFLOJ_45650
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Entry
MFLOJ_45650 CDS
T06524
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mfj
Mycobacterium florentinum
Pathway
mfj03420
Nucleotide excision repair
mfj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mfj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MFLOJ_45650 (uvrD1)
03430 Mismatch repair
MFLOJ_45650 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfj03400
]
MFLOJ_45650 (uvrD1)
Enzymes [BR:
mfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MFLOJ_45650 (uvrD1)
DNA repair and recombination proteins [BR:
mfj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MFLOJ_45650 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
MFLOJ_45650 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
CarD_TRCF_RID
DUF3013
DEAD
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BBX80778
LinkDB
All DBs
Position
4734490..4736826
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AA seq
778 aa
AA seq
DB search
MTAHATDDKLAAEVDQLLDGLNPHQRQAVVHEGSPLLIVAGAGSGKTAVLTRRVAYLIAA
RGVGVGQILAITFTNKAAAEMRERVVRLVGNRARAMWVSTFHSTCVRILRNQASLIKGLN
SNFSIYDADDSRRLLQMIGRDMGLDIKRYSPRLLSVAISNLKNELIDPDQAVSNLTDESD
DLAHTVASVYGEYQRRLRAANALDFDDLIGETVAVLQTFPQIAQYYRRRFRHVLVDEYQD
TNHAQYVLVRELVGRDDGNSSDDDVPPAELCVVGDADQSIYAFRGATIRNIEEFERDYPD
AATILLEQNYRSTQNILSAANSVIARNSGRREKRLWTDAGDGELIVGYVADNEHDEARFV
AQEIDALAEQDEITYNDVAVFYRTNNSSRSLEEVFIRAGIPYKVVGGVRFYERKEIRDIV
AYLRVLDNPGDAVSMRRILNTPRRGIGDRAEACVAVYAENTGASFADALVAAAEGKVPML
NSRAEKAISGFVELLDELRGHLDDDLGELVEAVLEHTGYRRELESSTDPQELARLDNLNE
LVSVAHEFSIDAANAAALDESAEAPEDEDVPETGALASFLERVSLVADTDEIPEHAAGVV
TLMTLHTAKGLEFPVVFVTGWEDGMFPHMRALDDPRELSEERRLAYVGITRARQRLYLSR
AIVRSSWGQPMLNPESRFLQEIPQELMDWRRTAPAPSYSAPVSGAGRFGTPRAAPARSGA
TKRPLLVLEPGDRVTHDKYGLGRVEEVSGVGESAMSLIDFGSSGRVKLMHNHAPVSKL
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgcacgcaactgatgacaaactcgcggccgaggtagatcagctgctcgacggc
ctcaatccgcaccagcgtcaagcggtggtacacgagggctcgcccctcctgatcgtggcc
ggcgcgggctccgggaagaccgcggtgctgacgcgacgcgtggcgtatctcatagccgcg
cgcggcgttggggtcgggcagatactggccatcaccttcaccaacaaagccgccgctgag
atgcgtgaacgggtggtgaggctggtcggcaaccgcgcccgtgcgatgtgggtgtccacc
ttccactcgacctgcgtgcgcatcctgcgcaatcaggcctccttgataaaaggcctcaat
tccaacttctctatctacgacgccgacgactcgcgccgcttgctgcagatgatcgggcgc
gacatgggcctggacatcaagcggtactcgccgcggctgctgtccgtcgcgatctcgaac
ctgaagaacgagctgatcgatccggatcaggctgtgtccaacctcacggacgaatccgat
gacttggctcacaccgtggcctctgtatatggcgaataccaacggcggctgcgggcggcc
aacgcgctggacttcgacgacctgatcggcgagacggtcgcggtgctgcagaccttcccg
cagatcgcccagtactaccggcgccggttccgccacgtcctggtcgacgaataccaggac
accaaccacgctcagtacgtactggtgcgggaattggtaggacgcgacgacggaaattcg
tccgacgatgacgtaccgcccgcggagttatgtgtagtcggcgatgccgatcagtcgatc
tacgcgttccggggcgccaccattcgcaatatcgaggagtttgaacgcgactaccccgat
gcggccaccattctgctggagcagaattaccgttcgacgcagaacattctttcggcggcc
aattcggtgatcgcgcgcaactctggacgccgggagaagcggctgtggaccgacgcaggt
gacggagagttgatcgtcggctatgtcgccgacaatgagcacgacgaggcccggttcgtc
gcccaagaaattgacgcgctcgccgagcaggacgaaattacctataacgatgtagccgtc
ttctatcgcaccaacaattcgtcgcggtcgttggaagaggtgttcatccgcgccggcatc
ccctacaaggtcgtcgggggagtgcgattctacgagcgcaaggaaatccgcgacatcgtc
gcctatttgcgggtgctggacaaccccggcgacgcggtcagcatgcggcgcatcctcaac
acgccgcgccggggcatcggagaccgcgccgaggcatgtgtggccgtgtacgccgagaac
accggcgccagcttcgccgacgcgttggtcgccgccgccgaaggcaaagttccgatgctc
aattcccgtgcggagaaggcaatttcgggattcgtcgagctgctcgacgagttgcggggc
cacctcgacgacgacctcggcgagctggtcgaggcggtgctcgaacacaccggatatcgt
cgggagctggagtcctcgacggacccccaggagctggcccggttggacaacctcaacgaa
ctcgtcagcgtcgcacacgaattcagcatcgatgcggccaacgccgccgcgctcgacgaa
tccgcggaggcccccgaggacgaagacgtgcccgaaaccggtgcgctagcttcgtttttg
gagcgggtatccctggtcgccgataccgacgagattcccgagcacgcggccggcgtggtg
acgctgatgacgttgcacacggccaagggcctggagttcccggtggtgttcgtcaccggc
tgggaggacgggatgttcccgcacatgcgggcgctcgatgatccgcgcgaactctccgag
gaacgccggctggcctacgtgggcatcacccgcgcccggcaacgtctgtatctgagccgg
gctatcgtccggtcctcctgggggcagccgatgctcaacccggaatcgcgtttcctgcaa
gagattccgcaagagctgatggactggcggcgcactgcgccggccccgtcatatagcgcg
ccggtcagcggtgccggacggttcgggacgccgcgtgccgcgccggcgcgctccggggca
accaaacgtccgctactggtgctggagcccggcgatcgggttactcacgacaagtacggg
ctgggccgcgtcgaggaagtctccggcgtcggcgaatcggcgatgtcgctgatcgacttc
ggcagctccgggcgggtcaagctgatgcacaaccacgctccggtcagcaagctctaa
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