Mycobacterium florentinum: MFLOJ_49150
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Entry
MFLOJ_49150 CDS
T06524
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mfj
Mycobacterium florentinum
Pathway
mfj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MFLOJ_49150 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfj03019
]
MFLOJ_49150 (deaD)
03009 Ribosome biogenesis [BR:
mfj03009
]
MFLOJ_49150 (deaD)
Enzymes [BR:
mfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MFLOJ_49150 (deaD)
Messenger RNA biogenesis [BR:
mfj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MFLOJ_49150 (deaD)
Ribosome biogenesis [BR:
mfj03009
]
Prokaryotic type
rRNA helicases
MFLOJ_49150 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
HEM4
adh_short
CMS1
Flavi_DEAD
P-loop_SecA
Cas3-like_C_2
B_solenoid_dext
Motif
Other DBs
NCBI-ProteinID:
BBX81128
LinkDB
All DBs
Position
5115242..5116891
Genome browser
AA seq
549 aa
AA seq
DB search
MRAIADVGYESPTAIQAATIPALMGGSDVVGLAQTGTGKTAAFAIPILSKIDVTNKATQA
LVLAPTRELALQVAEAFSRYGAHLPKINVLPIYGGSSYTVQLSGLRRGAQVVVGTPGRVI
DHLERGTLDLSHVDYLVLDEADEMLTMGFAEEVDRILSETPEYKQVALFSATMPPAIRKL
TTKYLHDPLEVTFKAKTATADNISQRYVQVAGPRKMDALTRVLEVEPFAAMIVFVRTKQA
TEEVAEKLRARGFSAAAINGDIAQAQRERTIAALKDGRIDILVATDVAARGLDVERISHV
LNYDIPHDTESYVHRIGRTGRAGRSGNALLFVSPRERHMLKAIERATRQTLTEVELPSVE
DVNAQRVAKFADSITDTLGGPGIELFRRLVEDYEREHDVPMADIAAALALQSRDGEAFLM
SPEPPPQRRERPERNTEHRDRTDKPRQTRDFATYRIAVGKRHKIGPGAIVGAIANEGGLH
RSDFGHIAIGPDFSLVELPPKLSPATLKRLEKTRISGVLIDLKRDRSSGKSAERPGRSGG
PKRRRKDAG
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgcgggccatcgccgacgtcggttacgaatcgccgaccgcgattcaggcggcgacaatt
ccggcgctgatgggcggctccgacgtggtcggactggcgcagaccggcaccggaaagacc
gcagcgttcgccatcccgatcctgtccaagatcgacgtcaccaacaaggcgacccaggcc
ctggtgttggcgcccacccgcgagctggccttgcaggtggccgaggcattcagtcgctac
ggcgcccacctgcccaagatcaacgtgctgccgatctatggcgggtcgtcctacacggtg
cagctgtctggcctgcggcgcggtgcacaggtggtggtcggcaccccgggtcgggtcatc
gaccacctcgagcgtgggacgctcgacctgtcgcacgtggattacctggtgctcgacgag
gccgacgagatgctcacgatgggcttcgccgaggaagtcgaccgcatcctctccgaaaca
ccggaatacaaacaggtggcgctgttctcggcgaccatgccgccggccatccgcaagctc
actaccaaatacctgcacgatccgctcgaagtcaccttcaaagcgaaaaccgcgacagcc
gacaatatttcgcagcgctacgtccaggtggccggaccgcgcaagatggacgcgctgacc
cgggtactggaagtcgagccgttcgcggcgatgatcgtcttcgtgcgcaccaagcaggcc
accgaggaggtcgccgaaaagctgcgtgcccgagggttttccgcggccgccatcaacggc
gacatcgctcaggcccagcgtgagcggaccatcgcggcgctcaaggatggaaggatcgac
atcctggttgccaccgacgtggcggccagaggcctggatgtggaacgcatctcgcatgtg
ctcaactacgacatcccgcacgacaccgagtcctacgtccaccggatcggacgcaccggc
cgcgccggccgttcgggaaacgcgctgctgttcgtctcgccgcgtgagcgccacatgctc
aaggcgatcgaaagggcgacccggcaaacgttgaccgaggtcgaattgcccagcgtcgag
gatgtcaacgcgcagcgggtggcgaaattcgcggattccattaccgatacgcttggcggc
ccaggcatcgagctgttccgcaggctggtcgaggactacgagcgcgagcacgacgtcccg
atggccgacatcgcggccgcgctcgctttgcagtcgcgcgatggtgaggcgttcctgatg
tcgcccgaaccgccgccgcagcgacgtgagcggcccgaacgtaacaccgagcatcgggat
cgcacggacaagccaaggcaaacaagagatttcgccacctatcgaatcgccgtgggcaag
cggcacaagatcgggccgggtgccatcgtcggcgccatcgccaacgagggcggcctgcat
cgcagcgatttcggccacatcgcgatcgggcccgacttctcgttggtggagctgccgcca
aagctctcccccgcgacgctcaaaaggcttgaaaagacccgtatctcgggtgtgctgatc
gacctgaagcgggaccgctcgtccggcaagtccgctgaaaggcccggccgatcgggtggg
cccaagcggcgcagaaaagacgctggatga
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