Mycobacterium florentinum: MFLOJ_50120
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Entry
MFLOJ_50120 CDS
T06524
Symbol
alkA
Name
(GenBank) putative bifunctional transcriptional activator/DNA repair enzyme AlkA
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mfj
Mycobacterium florentinum
Pathway
mfj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mfj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MFLOJ_50120 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mfj03000
]
MFLOJ_50120 (alkA)
03400 DNA repair and recombination proteins [BR:
mfj03400
]
MFLOJ_50120 (alkA)
Enzymes [BR:
mfj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
MFLOJ_50120 (alkA)
Transcription factors [BR:
mfj03000
]
Prokaryotic type
Helix-turn-helix
AraC family
MFLOJ_50120 (alkA)
DNA repair and recombination proteins [BR:
mfj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MFLOJ_50120 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HHH
DUF6233
Motif
Other DBs
NCBI-ProteinID:
BBX81225
LinkDB
All DBs
Position
complement(5222823..5224310)
Genome browser
AA seq
495 aa
AA seq
DB search
MHDDFERCYRAVQSKDARFDGWFVTAVLTTRIYCRPSCPVRPPFARNVRFYPAAAAAQRA
GFRACKRCRPDASPGSPEWNVRGDVVARAMRLIADGTVDRDGVGGLAAHLGYTTRQLERL
LQAEVGAGPLALARAQRSQTARLLIETTDLPFGDIAFAAGFSSIRQFNDTVQLVFENTPT
ELRRRAAARFGSDTTSPGTVCLRLPVRTPFAYEGAFGHLAAGAVPGCEEVRDGAYRRSLR
LPAGNAVVALTPAVDHVRCLLVLDDFRDLTTAIARCRRLLDLDADPEAIVDTLSRDPLLA
PVVAKAPGQRIPRTVDEAELAVRAVLGQQVSTKAARTHAGRLVHAYGPPVHDPEGALTHA
FPAIEQLAEIDPIHLAVPKARQRTMRALIDGLLDGSVVLDAGSDWDGARTQLLALPGIGP
WTAEVIAMRGLGDPDAFPASDLGLQLAAKQLGLPTDQRKLIEHSAHWRPWRSYATQHLWT
TLEHPVNQWPPQEVV
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgacgatttcgaacgctgctaccgggcggtccagtccaaggacgcccggttcgac
ggctggttcgtcacggcggtgctcaccacccgcatctactgccggcccagctgcccggtg
cgcccgccgttcgcacgcaacgtgcggttctatccggccgcggcggccgcacagcgggcg
ggtttccgcgcgtgcaagcgatgccgtcccgacgcctcgccgggatcgcccgaatggaac
gtgcgcggcgacgtcgttgcgcgggcgatgcggctcatcgccgacggcacggtggaccgc
gacggcgtgggcggtctggccgcccacctcgggtacactacccggcagctggagcggctt
ttgcaggccgaagtcggcgccggtccgctcgcgctggctcgcgcgcaacgaagccagacc
gcccggctgctgatcgagacgaccgatctgccgttcggcgacatcgcattcgccgccggc
ttttccagcatccgccaattcaacgacacggtgcagctggtgttcgaaaacacaccgacc
gagttgcgcagacgcgcggccgcccggttcgggtccgacacgacttcgcctgggacagtg
tgtcttcggctgccggtacgtaccccgttcgcctatgagggcgccttcggccatctggcc
gcgggtgccgtcccgggttgcgaggaggtgcgcgacggcgcctaccggcgcagcctacgg
cttccggcgggcaacgccgtggtcgcgctgacgccggccgtcgaccacgtgcgctgccta
ctcgtgctcgacgacttccgcgatctgacgaccgcgatcgcccgctgccggcggctgctc
gacctcgacgccgatccggaagcgatcgtggacacgctgagccgcgacccgctgctggcc
cccgtcgtggccaaggcacccggacaacgcattccgcgcacggtcgacgaggccgaactc
gcggtgcgtgccgtgctgggtcaacaggtgtcgacgaaggccgcgcgcacccacgccggc
cgattggtccacgcgtacggcccgccggtgcacgaccccgaaggcgcactgacgcatgcc
ttcccggcaatcgagcaactcgccgagatcgatcccatccatctggcggtccccaaggcc
cggcagcggacgatgagggcgctgatcgacgggcttctcgatggcagcgtggtgctggac
gccggaagcgactgggacggtgcgcgcacccagctgctggccctgccggggatcggccca
tggaccgcggaggtgatcgcgatgcgcggcctcggggacccggacgcttttcctgccagt
gacctcgggctacaactcgccgccaaacagctgggcttgccgacggatcagcgcaaactc
attgagcacagcgcacattggcgcccctggcgctcgtatgccacccagcatttgtggacc
accctcgagcacccggtgaaccaatggccaccacaggaggtcgtatga
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