Mycobacterium florentinum: MFLOJ_52360
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Entry
MFLOJ_52360 CDS
T06524
Name
(GenBank) hypothetical protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mfj
Mycobacterium florentinum
Pathway
mfj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MFLOJ_52360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfj03019
]
MFLOJ_52360
03009 Ribosome biogenesis [BR:
mfj03009
]
MFLOJ_52360
Enzymes [BR:
mfj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
MFLOJ_52360
Messenger RNA biogenesis [BR:
mfj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MFLOJ_52360
Ribosome biogenesis [BR:
mfj03009
]
Prokaryotic type
rRNA processing factors
MFLOJ_52360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
BBX81449
LinkDB
All DBs
Position
5479476..5482157
Genome browser
AA seq
893 aa
AA seq
DB search
MVDALSALDGRIRSAHSGVDYEDAIRVRDLLSPRPPENFVAFSNAEAASPGEPGPRLMTE
PPIDRPAYMPLFVAPQPVAADHTARAADSTDTDDSDGDDDGEDDEEQADRPANRRRRRGR
RGRGRGRGEQGGSDQDDDGDGPKSGDSDDSDDADDQDSDDSDDGSDDGSPDGGNRRRRRR
RRRKSGSGDDNDDGSPDDPPNTVVHERAPRGKGGSSDDGRNNGSSNAEIKGIDGSTRLEA
KRQRRRDGRDAGRRRPPVLTEAEFLARREAVERVMVVRDRVRTEPPHPGSRYTQIAVLED
GIVVEHFVTSAASASLVGNIYLGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLG
GAERKIEKALKPGDYVVVQVSKDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPD
TERQRLKEILREVVPSNAGVIIRTASEGVKEDDIRQDVTRLQERWEQIEAKASETKEKAA
GAAVALYEEPDVLVKVIRDLFNEDFAGLIVSGDDAWSTINDYVNSVAPDLVSKLTKYDPP
ATADGQPGPDVFAVHRIDEQLAKATDRKVWLPSGGTLVIDRTEAMTIVDVNTGKFTGSGG
NLEQTVTKNNLEAAEETVRQLRLRDIGGIVVIDFIDMVLESNRDLVLRRLTEALARDRTR
HQVSEVTSLGLVQLTRKRLGTGLIEAFSTSCPNCGGRGILLHADPVDSAPATGRKSESGG
GRRGKRSKKNRSEEPADQPAVAKVPVHAPGEHPMFKAMATRDNGEAEEGGEDVTTEVDEQ
TKVEGPADLDADSDAFEDAEDDDNDQDSDDVDEEDSADEDLDDDDDDLDELDDEDLDDDD
EDLDDDEDLDDDEDPDDENGDAEDSAAEAGSDFERPRRRRAAGRPAGPPIHMG
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
gtggtagacgcgctcagcgcgctggatggacgcatccgcagcgcacattccggggtggac
tacgaggatgcgatccgggtgcgtgacctgctgtcgccccggccgccggagaacttcgta
gccttcagcaacgccgaagccgcctcgcccggggaacccgggccccggctgatgacggag
cccccgatcgatcgccccgcctacatgccgctgttcgtagcgccgcagccggtcgcggcc
gatcacaccgcgcgcgccgccgacagcaccgacaccgacgattccgacggcgacgacgac
ggcgaggacgacgaggagcaggccgatcggcccgccaaccggcggcggcgacgcggccgg
cggggacgtggccgcggccgcggcgaacagggcggatccgaccaggacgacgacggcgac
ggcccgaaatccggtgactcggatgactctgacgacgccgacgaccaggactcggacgac
tccgacgacggctccgatgacggttcgccggacggcggcaatcggcgtcgtcgcaggcgc
cgtcggcgcaagtccggttccggtgacgacaacgacgacggctcgcccgatgatccgccg
aacaccgtcgtgcacgagcgcgcgccgcgtggcaagggcggctcctccgacgacggcagg
aacaacggctcgagcaatgccgagatcaagggcatcgacgggtcgacgcggctggaggcc
aagcggcaacgccgccgcgacgggcgtgacgccggacggcgccgcccgccggtactgacc
gaggccgaattcctggcgcgccgcgaggccgtcgaacgggtcatggtggtgcgcgaccgg
gtccgcaccgagccgccgcaccccggctcccgctacacgcagatcgccgtgctcgaagac
ggcatcgtcgtcgagcatttcgtgacgtcggcggcgtcggcgtcactggtcggcaacatc
tacctgggcatcgtgcagaacgtgctgccctcgatggaggcggcgttcgtcgacatcggt
cggggccgcaacggcgtgctgtacgccggcgaggtcaactgggaggccgccggactgggc
ggcgccgagcgcaagatcgaaaaggcgctcaagcccggcgattacgtcgtcgtccaggtc
agcaaggacccggtcggacacaagggcgcccggctgaccacgcaggtctccctggccggc
cgctacctggtgtacgtgccgggtgcgtcgtcgaccgggatcagccgcaagctgcccgac
accgaacgccagcgtctcaaggagatcctgcgtgaggtggtgccgtcgaacgccggagtg
atcatccggaccgcgtccgagggcgtcaaagaggacgacatccgccaggatgtcacccgc
ctgcaggagcgctgggaacagatcgaggccaaggcgagcgagaccaaggagaaggccgcc
ggcgctgcggtggcgctctatgaagagcccgacgtgttggtcaaggtcatccgcgacttg
ttcaacgaggatttcgcgggcctcatcgtctccggcgacgacgcctggagcaccatcaac
gactacgtgaattcggttgcgcccgacctggtttcgaagctgaccaagtacgaccccccc
gcgacggcggacggtcagcccgggccggacgtgttcgcggtgcatcgcatcgacgagcaa
ctggccaaggcgacggaccgcaaggtgtggctgccctcgggcggaacgctggtcatcgac
cggaccgaggcgatgacgatcgtcgacgtcaacaccggcaagttcaccggatcgggcggc
aacctcgaacagacggtcaccaagaacaatctcgaggcggccgaggagaccgtgcgccag
ctgcggctgcgcgacatcggcggcatcgtggtcatcgacttcatcgacatggtgctcgaa
tccaaccgcgacctggtgctgcgccggctgaccgaggcgctggcccgcgaccgcacccgt
caccaggtgtccgaggtgacctcgctgggcctggtgcagttgacccgcaagcgactggga
accggtctgatcgaggcgttttcgacgtcgtgcccgaactgcggcggccgcggaatcctg
ctgcacgccgacccggtcgactcggccccggcgaccgggcgcaagtccgagtccggcggc
ggccggcgcggcaagcggtcgaagaagaaccgatccgaagagcccgccgatcagcccgcc
gtcgccaaggtgcccgtacacgcgccgggcgaacacccgatgttcaaggccatggcgact
cgcgacaacggtgaggccgaggagggtggcgaggacgtcaccaccgaggtcgacgagcag
accaaggtggagggtcccgccgatctggacgccgactccgatgcctttgaggacgccgag
gacgacgacaacgaccaggactccgacgacgtcgacgaggaggactcggcagacgaggac
ctcgacgatgacgacgacgacctcgacgagctcgacgacgaggatctcgacgatgacgac
gaggacctcgatgacgacgaggacctcgatgacgacgaggaccccgacgacgaaaacggc
gacgcggaggattccgcggccgaggccgggtcggactttgagcgtccgcggcgtcggcgc
gcggcgggccggccggccggcccacccatccacatgggctga
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