Methanofollis formosanus: E2N92_00545
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Entry
E2N92_00545 CDS
T09788
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mfk
Methanofollis formosanus
Pathway
mfk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mfk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E2N92_00545 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfk03400
]
E2N92_00545 (uvrB)
DNA repair and recombination proteins [BR:
mfk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E2N92_00545 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E2N92_00545 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
UVR
ResIII
AAA_30
DEAD
P-loop_SecA
AAA_22
AAA_16
UB2H
Motif
Other DBs
NCBI-ProteinID:
QYZ78022
UniProt:
A0A8G0ZXR4
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Position
125543..127483
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AA seq
646 aa
AA seq
DB search
MTEFELDAAFVPKGSQPGAIKALTAGIEGGERFQTLLGVTGSGKTFTVANVIEAVQRPTL
VLAHNKTLAAQLYHEFSGFFPQNRVEYFVSYYDYYQPESYLPRKDQYIEKVTSVNPKIEQ
MRLAATASVLSRPDTIIVASVSCIYGLGNPANFRGMGFELKHGDRVRRADLLERLVEIQY
ERNDLDLAPGRFRAKGDTIDLIPAYFNDIIRIELFGDEVDRISEIDAVAGKRKETMEYFY
LYPARHFVATEEERKRAVVSIKKELDEVLPTLDIFEAHRLEQRVLFDIEMIEETGSCKGI
ENYSRHFDGRRAGEKPYCLLDYFPDDFLMVVDESHQTLPQVRGMYHGDRSRKETLVKYGF
RLPSAFDNRPLTFGEFEGYMKNVICVSATPGAYELQHSAGVVEQIIRPTGLVDPVVEVRP
VEGQVEDVMEEIRRTIDRGDRVLVTTLTKRLAEELTDFLAEQGIKTRYLHSEINALERTE
IIRRLRLGTFDVLVGINLLREGLDIPEVGFVGILDADKEGFLRDARSLIQTIGRAARNAN
ARVVLYADHETDSIRTALAETERRRQMQVAYNRAHGIVPQTVTKPVPAKEVDLTDTKHVP
KAEIPNLIIEMEAQMHEAAEHLDFERAILLRDQVRELKAKSEKSAL
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatttgaattggatgcggcatttgtcccgaagggttcgcagccaggggcgatc
aaagcactgaccgccgggatcgagggcggcgagcggttccagaccctcctcggcgtcacc
gggtccgggaagaccttcacggtcgccaacgtcatcgaggcggtgcagcgcccgaccctg
gtgctcgcccacaacaagaccctggcggcacaactctaccacgagttctcgggatttttc
ccccagaaccgggtggagtacttcgtctcgtactacgactactaccagcccgaatcgtac
ctcccgagaaaggaccagtatatcgagaaggtcacctccgtcaaccccaagatcgagcag
atgcgtctcgcggccacggcctcggtgctctcgcggccagacaccatcatcgtcgcctcg
gtctcctgcatctacggcctgggcaacccggcgaacttcagggggatgggcttcgaactg
aagcacggggaccgggtgcggcgggccgatctgttggagcgcctggtcgagatccagtac
gagcgaaacgacctcgacctcgcccccggacggttcagggcgaagggcgacaccatcgac
ctcatcccggcgtacttcaacgacatcatcaggatcgaactcttcggcgacgaggtggac
cggatctcggagatcgatgcggtcgccgggaagagaaaggagacgatggagtacttctat
ctctacccggcccgccacttcgtcgccaccgaggaggagcgcaaacgggcggtcgtctcc
atcaaaaaggaactcgacgaggtgctcccgaccctcgacatcttcgaggcccaccgtctc
gaacagcgggtcctcttcgatatcgagatgatcgaggagaccgggagctgcaaggggatc
gagaattattcccgccacttcgacgggcgcagagcgggggaaaagccgtactgtctcctc
gactatttcccggacgacttcctgatggtcgtcgacgagagccaccagactctcccgcag
gtgcgggggatgtaccacggcgaccgttcccgcaaagagaccctggtgaagtacggcttc
cgcctcccctcggccttcgacaaccgccccctcaccttcggcgagttcgaggggtacatg
aagaacgtcatctgcgtctcggcgacgcccggcgcgtacgaactgcagcactcggccggg
gtcgtggagcagatcatcaggccgaccgggctcgtggacccggtggtggaggtgcgcccg
gtcgaggggcaggtcgaggacgtgatggaggagatcaggcggacgatcgaccgcggcgac
cgggtgctggtcaccacgctcaccaagcggcttgccgaggaactcaccgacttcctcgcg
gagcagggtatcaagaccagatacctccactctgagatcaacgccctcgaacgcaccgag
atcatccgccgcctccgccttggcaccttcgatgtgctggtcgggatcaacctcctgcgg
gaggggctcgacatccctgaggtcgggttcgtcgggatcctggacgccgacaaggagggg
ttcctccgcgacgcccgcagtctgatccagaccatcggccgggcggcacgcaacgccaac
gcccgcgtggtgctgtacgccgaccacgagaccgactcgatccgcaccgccctcgccgag
accgaacgccgccggcagatgcaggtcgcctacaaccgggcgcacgggatcgtgccgcag
acggtcaccaaaccggtcccggcaaaggaggtggacctcaccgacacgaagcatgtcccg
aaggccgagatccccaacctcatcatcgagatggaggcgcagatgcacgaagcggcggag
cacctcgacttcgagcgggcgatccttctgcgcgaccaggtgagggagttgaaggcgaag
agtgaaaaatcagctttgtag
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