Methanofollis formosanus: E2N92_02540
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Entry
E2N92_02540 CDS
T09788
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mfk
Methanofollis formosanus
Pathway
mfk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E2N92_02540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfk03019
]
E2N92_02540
03009 Ribosome biogenesis [BR:
mfk03009
]
E2N92_02540
Enzymes [BR:
mfk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E2N92_02540
Messenger RNA biogenesis [BR:
mfk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E2N92_02540
Ribosome biogenesis [BR:
mfk03009
]
Prokaryotic type
rRNA helicases
E2N92_02540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
ARM_TANGO6
Motif
Other DBs
NCBI-ProteinID:
QYZ78389
UniProt:
A0A8G1EFQ6
LinkDB
All DBs
Position
complement(583295..584908)
Genome browser
AA seq
537 aa
AA seq
DB search
MQEYCGFSSFSISPNILKAIEDMGFEEPTPIQKLAIPKILEGNDVTGQAQTGTGKTAAFG
IPLVEKIAPEDPRTQALILSPTRELALQTSGEIRRLSRYEGNLSVVPIYGGQPIGRQFGA
LRRGAQIIVGTPGRVIDHLERGTLSLDAVQTVVLDEADQMLDMGFREDIERILSETPEDR
QTVLFSATMPRPIREISRRFQRDPAFVRVQQKEMTVPQVEQLSVKVRGKEKPEVLSRLLQ
IYNPELTIVFCNTKQGVDDLTAQLHALGVRAEALHGGMKQMQRDRVMGRFRNDAIDVLIA
TDVAARGIDVEDVELVINYDLPQDIEYYVHRIGRTARAGRGGRAITFVGPRDGYRLKAIE
RHSRARIHNLPVPTERDVEKSRMRNLAEKVRQTIEDGDLDRYAGIIDQVIGEDDLSPRDV
AAALLKMTLSHGTRQKSAATGAEPEDRSEVEAGMVRLHLNAGKDRNLRPKDIVGALAGET
GISGRSIGAIRIEETNTFVEVPEESAKAVVERMKGKSIGSVRLIGGTCLTFATPANR
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaatattgtggcttctcaagtttttccatctccccgaatatcctcaaggcaata
gaagatatgggctttgaggagccaacacccatccagaaactcgctattccaaagatactg
gaaggaaatgacgttaccggtcaggcccagaccggtacgggcaagacggcggcattcggg
attccgctcgtcgaaaagatcgctcctgaagaccccaggacgcaggcgctgatcctctct
ccgacgcgcgaactcgccctccagacctccggcgagatcagaaggctttctcgctacgag
ggaaatctctcggtcgtcccgatctacggcgggcagccgatcgggcggcagttcggagca
ctgcggcgcggggcgcagatcatcgtcgggacgccgggacgggtgatcgatcacctggag
cgcggcaccctctcccttgacgctgtgcagaccgtcgtcctcgacgaggccgaccagatg
ctggacatgggtttcagggaggacatcgagcggatcctctcggagaccccggaagaccgc
cagaccgtcctcttctcggcgacgatgcccagaccgatccgtgagatctcgcgccggttc
cagcgggatccggcatttgtgcgggtgcagcagaaagagatgaccgtcccgcaggtcgag
caactctcggtgaaggtgcgggggaaggagaagccggaggtgctctccaggctcctccag
atctacaaccccgaactcacgatcgtcttctgcaacaccaagcagggagtggacgacctc
actgcgcaactccatgccctgggggtcagggccgaggccctccacggcgggatgaagcag
atgcagcgcgaccgggtgatgggcaggttcaggaacgacgccatcgatgtgctcatcgcc
accgacgtcgccgccagggggatcgatgtcgaggacgtggaactggtcatcaactacgac
ctcccgcaggacatcgagtattatgtccaccggatcgggcggacggccagggccgggcgc
ggcggccgggcgatcacctttgtcggaccgcgggacgggtaccggctgaaggcgatcgaa
cgccactccagggccaggatccacaaccttccggtcccgaccgagcgtgacgtcgagaag
agcagaatgcgcaacctggccgagaaagtcaggcagacgatcgaggacggggacctcgac
cggtacgccgggatcatcgaccaggtgatcggcgaggacgatctctctcccagggacgtc
gcggcggccctcctgaagatgacgctcagtcacgggacgcggcaaaaatcggcggcaaca
ggtgcggaacctgaggacagaagcgaggtggaggcagggatggtccgtcttcacctcaac
gccggcaaagaccgcaacctcaggcccaaagatatcgtgggggccctggccggtgagacc
gggatctccggacggtctatcggggcgatccggatcgaagagaccaacacctttgtcgaa
gtgcccgaggagtcggcaaaggccgtcgtcgagcgcatgaagggcaagagcatcggcagc
gtccgcctcatcggcggaacctgcctcacctttgcgacaccggccaaccggtga
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