Mesoplasma florum L1: Mfl209
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Entry
Mfl209 CDS
T00187
Name
(GenBank) virulence associated protein, ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
mfl
Mesoplasma florum L1
Pathway
mfl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mfl209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfl03019
]
Mfl209
03016 Transfer RNA biogenesis [BR:
mfl03016
]
Mfl209
Enzymes [BR:
mfl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Mfl209
Messenger RNA biogenesis [BR:
mfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Mfl209
Transfer RNA biogenesis [BR:
mfl03016
]
Prokaryotic type
tRNA degradation factors
Mfl209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
S1
OB_RNB
CSD2
S1CSD-TOTE-2
Pox_RNA_pol
S1_RRP5
RNase_II_C_S1
OB_RNR_1st
Motif
Other DBs
NCBI-ProteinID:
AAT75566
UniProt:
Q6F1Q7
LinkDB
All DBs
Position
234224..236338
Genome browser
AA seq
704 aa
AA seq
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MNKEIILQIVKENNEMISINSLATKLNYFDLPKLEDYLKELNEENILAFTTEKNVYLLGG
SFKKGNLRMNPKGFGFVNDVLQPEEEAYFVPPVSLNGCFDSDEVIFKVVKDQEKTRAEIV
ELCLRVKEFLIGEIVRSFDGKFLDFIPSDQAFTGFRIRILNKKEFPIQEYQIVKAKIISV
KERLLFVRLKKVIGDARKASDRILSIAEEFEIRTEFEKATLKEAERVNVPVEHEVDEINR
RMKNSLLDKMVVTIDGIDSKDLDDAICVEKLENGEFKLYVAIADVSHYVEPKTPLDKEAL
IRGNSTYLANRVLPMLPKILSDDLCSLNPNTKKFALACEMKFDKNGIMISKEVYETIMIS
KVRLNYNEVNEYIANKTWNHCEESRTMIDQAIELFKLIEQVKIKRGTITFDVREPKVIMD
ENSNVIEIKARQTGESEKLIEQFMVSANEAVAEIVYEMELPFIYRNHDKPDEEDLITWYQ
SLKSFGIDPKLTPLEMLDPININKTLKRISEQTKDPIEEELLNLSLLRYMAKAKYELENI
GHFGLSSKCYTHFTSPIRRYSDLIVHRYLKQYIINKDYDQKALEMNEAFIKKASVIINET
ETTSVDCEREVVKACTVEYMSDKIGNIYEGTISVALKFGIFVQLENMVEGLVHISNLEPN
IVYDETNKILIKHDNTFYRMGQKVKIKVISADIRKRKIDFILVK
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaaataatattacaaatagttaaagaaaataatgaaatgatatcaattaat
agtttagcaacgaagctaaactattttgatttaccaaaattagaagattacttaaaagaa
ctgaacgaagaaaatattcttgctttcactactgaaaaaaatgtttatttattgggtggt
tcttttaaaaaaggaaacttgagaatgaatccaaaaggatttggatttgtaaacgacgta
ttgcaacctgaagaagaggcttattttgttccccctgttagtttaaatggatgttttgat
agtgatgaagttatttttaaagttgttaaagaccaagaaaaaacaagagctgaaattgtt
gaattatgtttaagggttaaagaatttttaataggagaaatagtaagaagttttgatggt
aagtttttagattttatacctagtgatcaagcatttacaggttttagaattaggatatta
aataaaaaagaatttccaattcaagaataccaaattgtcaaagctaaaataatatcagtt
aaagaaagattattatttgtaagacttaaaaaagtaataggtgatgctagaaaagctagt
gatagaattttatccattgctgaagaattcgaaattagaacagagtttgaaaaagcaact
ttaaaagaggcagaaagagtaaatgttcctgttgagcatgaagttgatgaaataaacaga
agaatgaaaaattcattattagataaaatggttgttacaattgatggaattgactcaaaa
gatttagatgacgcaatatgtgttgaaaaattagaaaatggtgaatttaaattatatgtt
gctattgctgatgttagtcattatgttgaaccaaaaacaccattagataaagaagcatta
ataagaggtaactcaacttacttagctaatagagtcttacctatgcttccaaaaatttta
agtgatgatttatgttcattaaatccaaatacaaaaaaatttgcattagcatgtgaaatg
aagtttgataaaaatggaattatgattagtaaagaagtttatgaaacaattatgatttca
aaagtaagattaaactataatgaagttaatgaatatattgcaaataaaacatgaaatcat
tgcgaagaatcaagaacaatgattgatcaagcaattgaactatttaaattaattgaacaa
gtaaaaattaaacgtggaacaattacttttgatgttagagaaccaaaagtaataatggat
gaaaatagtaacgttattgaaattaaagcaagacaaactggtgaatctgaaaagttgatt
gaacaatttatggttagtgcaaatgaagctgttgctgaaatagtttatgaaatggaatta
ccatttatttatagaaatcatgataaacctgatgaagaagatttaattacatgatatcaa
tcattgaaatcatttgggattgatcctaaattaacaccattggaaatgttagatcctata
aacattaataaaacattaaaaagaattagtgaacaaaccaaagatcctattgaagaagaa
ttattaaacttatctcttttaagatatatggcaaaagctaaatatgaattagaaaatatt
gggcattttggtttatcaagtaaatgttatacccacttcacttcaccaattagaagatac
agtgatttaattgttcacagatatttaaaacaatacatcattaataaagattatgatcaa
aaagcattagaaatgaatgaagcatttatcaaaaaagcatcagtaataattaatgaaaca
gaaacaactagcgtagactgtgaacgagaagtagttaaagcttgtacagttgaatatatg
agcgataaaataggaaatatttatgaaggaacaatctctgtagcattaaaatttggtatt
tttgttcaacttgaaaatatggtagaaggtttggttcatatttcaaatcttgaacctaac
atagtttatgatgaaactaataaaatactaattaaacatgataatacattttatagaatg
ggacaaaaagttaaaattaaagttataagcgctgatattagaaaaagaaaaattgacttt
attttagttaaataa
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