Pseudoduganella flava: GO485_03205
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Entry
GO485_03205 CDS
T06346
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mfla
Pseudoduganella flava
Pathway
mfla00061
Fatty acid biosynthesis
mfla00071
Fatty acid degradation
mfla01100
Metabolic pathways
mfla01212
Fatty acid metabolism
mfla02024
Quorum sensing
mfla04146
Peroxisome
Module
mfla_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mfla00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GO485_03205
00071 Fatty acid degradation
GO485_03205
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GO485_03205
09145 Cellular community - prokaryotes
02024 Quorum sensing
GO485_03205
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mfla01004
]
GO485_03205
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mfla04147
]
GO485_03205
Enzymes [BR:
mfla01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GO485_03205
Lipid biosynthesis proteins [BR:
mfla01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GO485_03205
Exosome [BR:
mfla04147
]
Exosomal proteins
Exosomal proteins of breast milk
GO485_03205
Exosomal proteins of breast cancer cells
GO485_03205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QGZ38151
LinkDB
All DBs
Position
870549..872057
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AA seq
502 aa
AA seq
DB search
MHNLYNNGAPDVELASALTSTLNDANDAVLLAGPAGTWTGAELHRRVADLAALLRERFAP
GTALGILADNSPDWIVADLATRAAGLALVPLPSFFTPAQWAHALQAAQVQALFCAQAGHA
AALGYDVPLPCPGGLVLQNRADAGSVALPGIQKVTFTSGTTAQPKGVCLTAAQQWELAAT
LRDLLAPLGIRRHLNLLPLPVLLENIAGLYTALLSGATNICLPLAQVGLSGASGFDAQAC
LGAIAEHGAESVILLPQMLHALVAAAQPGDARLATLKFIAVGGARTPPALIAAARAKGFP
VYEGYGLSECGSVVALNLPGADRVGSAGRPLPNRRVRIAADGEIEVGGGTMAGYLGAPAA
QDDWLPTGDLGRLDADGFLHVDGRKKNVLITAYGRNVSPEWPETALLGAGAGVQAVVFGD
AQPYLVAAIVPARADVPDALIAAAVTRANADLPDYAQVRRWFRAAPFTPADGTATTNGRI
RRDAAASRCAAQLAAAYQPDGE
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacttgtacaacaacggggcgcctgacgtggaacttgcgtccgcactcacgtcg
accctcaacgacgccaacgacgccgtgctcttggccggccccgccggcacatggacgggc
gccgagctgcaccggcgcgtcgccgacctggccgcgctgctgcgcgaacgcttcgccccc
ggcacggcgctcggcatcctggcggacaactcgccggactggatcgtcgccgacctggcc
acccgcgccgccggcctggcgctggtgccgctgccgtcgttcttcacgccggcccagtgg
gcccatgcgctgcaggcggcgcaggtgcaggcgctgttctgcgcgcaggccggccacgcc
gccgcgctgggctatgacgtgccgctgccctgccccggcggcctggtgctgcaaaaccgc
gccgatgccggcagcgtggccctgccgggcatccagaaggtcacgttcacgtccggcacg
acggcgcaaccgaaaggcgtgtgcctgaccgccgcccagcaatgggagctggccgcgacc
ttgcgcgacctgctcgcgccgctgggcatccggcgtcacctgaacctgctgccgctgccg
gtgctgctggagaacatcgccggcctgtacacggcgctgctgtcgggcgccacgaacatc
tgcctgccgctggcgcaggtgggcctgtccggcgcgtccggcttcgatgcgcaggcgtgc
ctgggcgcgatcgccgaacacggcgccgagagcgtgatcctgctgccgcagatgctgcac
gcgctggtcgccgccgctcagccgggcgacgcacgcctggccacgctgaagttcatcgcc
gtcggcggcgcccgtacgccgccggcgctgatcgccgccgcgcgcgccaagggcttcccc
gtctacgaaggctacggcctgtccgaatgcggctccgtcgtcgcgctgaacctgcccggt
gcggaccgcgtcggcagcgccggccggccgctgccgaaccggcgcgtgcgcatcgcggcc
gatggcgagatcgaagtgggcggcggcacgatggccggctacctgggcgcccccgccgcg
caggacgactggctccccacgggcgacctgggccgcctcgatgccgacggcttcctgcac
gtcgatggccgcaagaagaacgtgctgatcaccgcctacggccgcaacgtgtcgccggaa
tggcccgaaacggcgctgttgggcgccggcgcaggcgtccaggccgtcgtgttcggcgac
gcgcaaccctacctggtcgccgccatcgtgccggcgcgggcggacgtgccggatgcgctg
atcgccgccgcggtcacgcgcgccaacgccgacctgcccgattacgcgcaggtgcggcgc
tggttccgcgccgcgccgttcacgccggccgacggcaccgccaccaccaacggccggatc
cggcgcgatgcggccgccagccgctgcgccgcccagctcgcagcagcctatcaacccgat
ggagaatga
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