Pseudoduganella flava: GO485_03555
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Entry
GO485_03555 CDS
T06346
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K03701
excinuclease ABC subunit A
Organism
mfla
Pseudoduganella flava
Pathway
mfla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mfla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GO485_03555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfla03400
]
GO485_03555
DNA repair and recombination proteins [BR:
mfla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GO485_03555
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GO485_03555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
AAA_29
AAA_16
DnaJ_CXXCXGXG
nSTAND1
AAA_25
AAA_33
RsgA_GTPase
NACHT
AAA_18
SLFN-g3_helicase
MeaB
Viral_helicase1
DNAPolymera_Pol
Motif
Other DBs
NCBI-ProteinID:
QGZ38216
LinkDB
All DBs
Position
complement(955496..958111)
Genome browser
AA seq
871 aa
AA seq
DB search
MEPLPNYPHTSTHGAPMRRKQEPDHQPSPNDGAPGPHACVRVRGAREHNLKNVNVELPRD
ALVVFTGVSGSGKSSLAFGTLYAEAQRRYLESVSPYARRLFHQMPVPEVDEIDGLPPAVA
LQQQRGTPTARSSVGSVSTLSNSLRMLYSRAGDYPAGQQLLYAESFSPNTAEGACPQCSG
LGRVYEATEASMVPDDSLTIRERAVAAWPPAWHGQNLRDILVTMGYDVDTPWRELPRKDR
DWILYTEETPTVPVYAGLTPEETRRALKRKETPSYQGTFTSARRYVLQTFANTESAAMKK
RVARYMVSTECPMCRGRRLRQEALSVTFAGMDIMTLSRLPIERLAGLLRPYADGSQPAGK
AKKDKPAEQLIVTRRIAADLCARLDTMLALGLGYLALERSTPTLSPGELQRLRLATAVRS
SLFGVVYVLDEPSAGLHPADTEALLAALAQLKAAGNSLFVVEHALDVIRRADWIVDVGPL
AGEGGGAILYSGPPDGLRNVAASHTRRYLFDEVTPPARERREPAGWLRLEGVTRNNLHDL
AVAFPLGVMCCVTGVSGSGKSTLVSQVLVDLVGTALGHTADEPADDEGLEPQLDDVVEED
TAGRIAGGIEGVRRLVRVDQKPIGRTPRSNLATYTGLFDAVRKLFAATPAARKHRYDAGR
FSFNVAKGRCAHCAGEGFVMVELLFLPSVYAPCPTCNGARYNADTLKITYKDRNIADVLG
MTVDEAHAFFADEEAVVRPLQVLREVGLGYLRLGQSATELSGGEAQRIKLATELQRATRG
GALYVLDEPTTGLHPFDTDRLVAQLNRLVDAGNSVIMVEHTMRVAAACDWVVDIGPGAGE
AGGTVVAAGPPEEVAASKESRTAPYLKAVMV
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggagccattaccgaactatccacacacttcgactcacggagcgccgatgcgccgcaag
caggaacccgaccatcaaccatcccccaacgacggcgcgcccggcccgcacgcctgtgtg
cgcgtgcgcggcgcccgcgagcacaacctgaagaacgtcaacgtggaactgccgcgcgat
gcgctggtggtgttcacgggcgtttccgggtcgggcaagtcgtcgctggccttcggcacg
ttgtatgccgaggcgcagcggcgctacctggaatccgtatcgccatacgcgcgccggctg
ttccaccagatgccggtgccggaggtggacgagatcgacggcctgccgcccgccgtcgcg
ttgcagcagcagcgcggcacgccgaccgcccgctcgtcggtgggcagcgtcagcacgctg
tccaattcgctgcgcatgctgtattcgcgcgccggcgactatccggccggccagcagttg
ctgtatgccgagtcgttttcgccgaacaccgcggaaggcgcctgcccgcaatgctcgggc
ctgggccgcgtctacgaagccaccgaggcatcaatggtgccggacgacagcctgacgatc
cgcgagcgcgccgtggccgcgtggccgccggcatggcacggccagaacctgcgcgacatc
ctcgtgacgatgggctacgacgtcgacacgccatggcgcgagctgccgaggaaggaccgc
gactggatcctgtacacggaagagacgccgacggtacccgtctacgcgggcctgacgccg
gaggaaacgcgccgcgcattgaagcgcaaggaaacgcccagctaccagggcacgttcacc
agcgcgcgccggtacgtgctgcagacctttgccaacacggaaagcgcggcgatgaagaag
cgcgtggcgcgctacatggtcagcacggaatgccccatgtgccggggccgccggctgcgc
caggaagcgctgtccgtcacgtttgccggcatggacatcatgacgttgtcgcgcctgccg
atcgagcgcctggccggcctgctgcggccctatgcggacggcagccagccggccggcaag
gcaaagaaggacaagcctgcggagcagctgatcgtcacgcgccgcatcgccgccgacctg
tgcgcgcggctcgatacgatgctggcgctgggcctgggctacctggcgctggagcgcagc
acgccgacgttgtcgccgggcgagctgcagcgcctgcggctggcgacggccgtgcgatcg
agcctgttcggcgtcgtctacgtgctggacgaaccgtcggccggcctgcacccggccgat
acggaagcgctgctggccgcgctggcgcagctgaaggcggcgggcaattcgctgttcgtt
gtcgagcatgcgctggacgtgatccggcgcgccgactggatcgtcgacgtgggcccgctg
gcgggcgagggcggcggcgcgattttgtacagcggtccgccggacggcttgcgcaacgtg
gcggcgtcgcacacgcggcgctacctgttcgacgaggtgacgccgccggcacgcgagcgt
cgcgaacccgccggctggctgcggctggaaggcgtcacccgcaacaacctgcacgacctg
gcggtcgccttcccgctgggcgtgatgtgctgcgtgaccggggtgtccggctcgggcaag
tcgaccctggtcagccaggtgctggtggacctcgtcggcacggcgctcggccatacggcg
gacgagccggccgatgacgagggcctggagccgcaactggacgacgtggtggaggaagac
acggcgggccgcatcgccggcggcatcgaaggcgtgcgccgcctggtgcgggtggaccag
aagccgatcggccgcacgccgcgctcgaaccttgccacctacacggggctgttcgacgcg
gtgcgcaagctgttcgccgccacgccggcggcccgcaagcaccgctacgacgcaggaaga
ttctcgttcaacgtcgccaagggccgctgcgcccactgcgccggcgaaggcttcgtgatg
gtcgaactgctgttcctgcccagcgtctacgcgccatgccccacctgcaacggcgcgcgc
tacaacgccgacacgctgaagatcacgtataaggaccgcaacatcgccgacgtgctgggc
atgaccgtcgacgaggcccacgcgttcttcgcggacgaggaagcggtggtgcggccgctg
caagtgctgcgcgaagtgggcctcggttacctgcggctggggcagagcgccaccgaactg
tccggcggcgaggcacagcgcatcaagctggccaccgaactgcagcgggccacgcggggc
ggcgcgctgtacgtgctggacgaaccgaccaccggcctgcacccgttcgatacggaccgg
ctggtggcccagctgaaccgcctggtcgatgcgggcaactccgtcatcatggtcgaacac
acgatgcgcgtggcggcggcctgcgactgggtcgtcgatatcgggccgggcgccggcgaa
gcgggcggcaccgtcgttgcggccgggccgccggaggaggtggcggccagcaaggagagc
cggacggcgccttatttgaaggctgtcatggtctga
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