Pseudoduganella flava: GO485_03930
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Entry
GO485_03930 CDS
T06346
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
mfla
Pseudoduganella flava
Brite
KEGG Orthology (KO) [BR:
mfla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mfla03009
]
GO485_03930
Ribosome biogenesis [BR:
mfla03009
]
Prokaryotic type
ribosomal protein modification factors
GO485_03930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
QGZ38281
LinkDB
All DBs
Position
complement(1041914..1044109)
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AA seq
731 aa
AA seq
DB search
MEIKVNFLDKLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCD
TRGIPTENIRLSQNNIVDPENRYQQTFKIQVELPPDISEKDRQGILRSIDRCTVKKVVQT
GPEFVIEEVENLDADAQALLTLQPGGGATYIPGKDLPLEQTIANMAGLLAELGIKIEIAS
WRNIVPNVWSLHIRDAHSPMCFTNGKGATKESALASALGEYIERINANHFYAGVFWGEDI
ANAPFVHYPNERWFQPGPKDALPAGILDEYCREIYDPDGELRGSHLIDTNSGNTARGICS
LPFVRQSDGETVYFPSNLVENLYASNGMSAGNTLAEAQVQCLSEIFERAVKREIIEGELA
LPDVPADVLAKYPGILAGIRGLEEQGFPVLVKDASLGGAYPVMCVTLMNPRTGGVFASFG
AHPRFEVALERSLTELLQGRSFEGLNDLPPPTFASNAVTEPNNFVEHFIDSSGVVSWRFF
SAKADHEFVEWDFSGHGEDSNAQEAATLLGLLADAGKEVYMAVYDQLGATACRILVPGYS
EIYPVEDLVWDNTNKSLLFREDILNLHRLDDDALADLLDRLENNELDEYSDIATLIGIEF
DENTEWGQLTVLELKLLIHLALGQFEDAHDLVGAFLQYNDNTAERRLFYRAMDAVLEVEL
DDELEMDDYVVNFRRLYGDARMDAALGSIDGTVRFYGLTPTSMKLEGLDRHARLLDSYRK
LHAARARAANA
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaactttctcgataagctgcgtctcgaagccaaattcgacgacttc
acggtgatcgccgaccagcccatccgctacaagggcgacggctcggcccccggcccgttc
gattacttcctggcgtcgtcggcgctgtgcgccgcgtacttcgtgaagttgtactgcgat
acccgtggcatccccaccgagaacatccggctttcgcagaacaatatcgtcgacccggaa
aaccgctaccagcagaccttcaagatccaggtcgagctgccgccggatatctccgagaag
gatcgccagggcatcctgcgctcgatcgaccgctgcaccgtgaagaaggtggtgcagacg
ggccccgagttcgtcatcgaggaagtggagaacctggacgccgacgcgcaggcgctcttg
acgttgcagccgggcggcggcgccacctacatccccggcaaggacctgccgctggagcaa
accatcgccaacatggcgggcctgctggcggagctgggcatcaagatcgagatcgcgtcg
tggcgcaatatcgtgccgaacgtctggtcgctgcacatccgcgacgcgcattcgccgatg
tgcttcaccaacggcaagggcgcgacgaaggaaagcgcgctggcttccgcgctgggcgag
tacatcgagcgcatcaacgcgaaccacttctatgcgggcgtattctggggcgaggacatc
gccaacgcgccgttcgtgcactacccgaacgagcgctggttccagccgggcccgaaggac
gcgctgccggccgggatcctcgacgaatactgccgcgagatctacgacccggacggcgag
ctgcgtggctcgcacctgatcgacaccaactccggcaacacggcgcgcgggatctgctcg
ctgccattcgtgcggcagtccgatggcgagacggtgtacttcccgtccaaccttgtcgag
aacctgtacgccagtaacggcatgagcgccgggaacacgctggccgaagcgcaggtgcag
tgcctgtccgagatcttcgaacgggccgtcaagcgcgagatcatcgagggcgagctggcg
ctgccggacgtgccggccgacgtgctggcgaagtacccaggcatcctggccggcatccgc
ggccttgaagagcagggcttccccgtgctcgtgaaggatgcgtcgctgggcggcgcctac
ccggtgatgtgcgtgacgttgatgaacccgcgcaccggcggcgtgttcgcgtcgttcggc
gcccacccgcgcttcgaggtggcactggagcgcagcctgacggaactgctgcagggccgc
agcttcgaaggcttgaacgacctgccgccgccgacgttcgccagcaatgccgtgacggag
ccgaacaacttcgtcgaacacttcatcgattcctccggcgtcgtgtcgtggcgcttcttc
agcgcgaaagccgatcacgagttcgtcgagtgggacttctccggccacggcgaagactcc
aacgcgcaggaagcggccacgttgcttggccttctggccgacgcgggcaaggaagtctac
atggccgtgtacgaccagctgggcgccacggcgtgccgcatcctggtgcccggctactcg
gagatctacccggtcgaggacctcgtatgggacaacacgaacaagtcgctgctgttccgc
gaagacatcctgaacctgcaccgcctggacgacgacgcgctcgcggacctgctggatcgc
ctcgagaacaacgagctcgatgaatactcggacatcgccacgctgatcggcatcgagttc
gacgagaacacggaatggggccagctgacggtgctcgaactgaagctgctgatccacctg
gcgctgggccagttcgaggacgcgcacgatctcgtcggcgccttcctgcagtacaacgac
aacaccgccgagcgccgcctgttctaccgggcgatggatgccgtgctggaggtggagctc
gacgacgagctggagatggacgactacgtggtcaacttccgccgcctgtatggcgacgcg
cggatggacgcggcgctgggttcgatcgacggcaccgtgcgcttttatggcctgacgccg
acgagcatgaagctggaaggcctggaccgtcacgcgcgcctgctcgacagctaccgcaaa
ctgcacgcggcgcgcgcccgcgcggccaacgcataa
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