Pseudoduganella flava: GO485_06290
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Entry
GO485_06290 CDS
T06346
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
mfla
Pseudoduganella flava
Brite
KEGG Orthology (KO) [BR:
mfla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mfla03009
]
GO485_06290 (dbpA)
Enzymes [BR:
mfla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GO485_06290 (dbpA)
Ribosome biogenesis [BR:
mfla03009
]
Prokaryotic type
rRNA helicases
GO485_06290 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
PAS_12
Motif
Other DBs
NCBI-ProteinID:
QGZ38702
LinkDB
All DBs
Position
1594989..1596407
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AA seq
472 aa
AA seq
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MTSFSSLPLSDAFLANLAQLGYHTMTPIQAASLPPVLEGRDLIAQAQTGSGKTAAFGIGL
LYNVNPAWFATQALVMCPTRELADQVANELRRLARSVANIKVLVLTGGAPMRPQIASLEH
GAHIVVGTPGRIRDHIGRQTLDLSGVRTLVLDEADRMTDMGFYDDIAAIVKLCPKRRQTL
LFSATYPQDIRQATEAFLVDPVEVVVEAQHAQSTIEQRFYEIGFDERDDAVARLLRHFKP
ASAIVFCNTKAHCRELVDTLRAQGFSALALYGELEQRERDEILVLFANRSCQILVATDVA
ARGLDIQDLEAVINADVSKDTEVHVHRIGRTGRAGGSGLSLTLCAPNEKKWVKLIEEYQG
GPVDWHPLSELDEDDPGHGDPAPMLTLCIAGGKKDKLRPGDVLGALTGEAKLAKEHVGKI
NVFEFQTYVALDRRIAHDAFDRLAAASRIAGDFGSEFGAIKGRNFKMRFIDV
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgacttccttctcttccctgcccctgtccgacgccttcctcgcgaacctcgcgcaactg
ggctatcacacgatgacgccgatccaggccgccagcctgccgcccgtgctggaaggccgc
gacctgatcgcgcaggcgcagacgggcagcggcaagacggccgctttcggcatcggcctg
ctgtacaacgtcaaccccgcgtggttcgccacgcaggcgctggtgatgtgcccgacgcgc
gagctggccgaccaggtggcgaacgaactgcgccggctggcccgcagcgtcgccaacatc
aaggtgctggtgctgacaggcggcgcgccgatgcggccgcagatcgcgtcgctggaacac
ggcgcgcatatcgtcgtcggcacgccgggccgcatccgcgaccacatcggccgccagacg
ctggacctgtccggcgtgcgcacgctggtgctggacgaggcggaccggatgacggacatg
ggcttctacgacgacatcgcggcgatcgtgaagctgtgcccgaaacggcgccagaccttg
ctgttctcggccacctacccgcaggacatccgccaggcgaccgaggcgttcctggtcgat
ccggtggaagtcgtcgtcgaagcgcagcacgcgcagtcgacgatcgagcagcgcttctac
gagatcggcttcgacgagcgcgacgacgcggtggcgcgcctgctgcggcacttcaagccg
gcgtccgcgatcgtgttctgcaataccaaggcgcactgccgcgaactggtcgacacgctg
cgcgcacaaggcttctcggcgctggcgctgtacggcgaactggaacagcgcgagcgcgac
gagatcctcgtgctgttcgcgaaccgcagctgccagatcctcgtcgcgaccgacgtcgcc
gcgcgcggcctcgacatccaggacctggaagccgtcatcaacgccgacgtgtcgaaggac
accgaggtgcacgtccaccgcatcggccgcaccggccgcgccggcggcagcggcctgtcg
ctgaccttgtgtgcgccgaacgagaagaagtgggtcaagctgatcgaggaataccagggc
ggccccgtggactggcacccgctgtccgaactggacgaggacgaccccggccacggcgac
ccggcaccgatgctgaccttgtgcatcgccggcggcaagaaggacaagctgcgccccggc
gacgtgctgggcgcgctgacgggcgaggcaaagctggccaaggaacacgtcggcaagatc
aacgtgttcgaattccagacctacgtggcgctggaccgccgcatcgcccacgacgcgttc
gaccgcctggccgccgccagccgcatcgccggcgacttcggtagcgagttcggcgcgatt
aaagggcgcaacttcaagatgcgcttcatcgacgtctga
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