KEGG   Pseudoduganella flava: GO485_07525
Entry
GO485_07525       CDS       T06346                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
mfla  Pseudoduganella flava
Brite
KEGG Orthology (KO) [BR:mfla00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mfla02044]
    GO485_07525 (tssC)
Secretion system [BR:mfla02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   GO485_07525 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 NADase_NGA
Other DBs
NCBI-ProteinID: QGZ38914
UniProt: A0A562PF01
LinkDB
Position
complement(1852328..1853809)
AA seq 493 aa
MSAQLQAVALPVVTDGAALLDEIVERSKVAKSSAEHARAKDIIGELVNQVLKGTVIVSHN
LSATIDRRVAELDRLISEQLSAIMHAPAFQKLEQSWTGLHYLVRNTATGPGLKVRMLNAT
KRELVRDFQSALEFDQSAMFKKVYEEEFGTFGGAPYAALLGDFEISRQPEDMYLIEQMSH
VAAAAHAPFVTAASPELFGLEGFGDLGKPRDLAKVFDTMEYAKWKAFRESEDARYVGLTL
PRFLGRLPFNPVDGTTVDGFNFVEEVDGTDHGKYLWCNAAYAFGAKLTKAFEEFGWCAAI
RGVEGGGLVDDLPTHTFKTDEGEVALKCPTEVAITDRREKELSDQGFISLVHCKNTAYAA
FFGAQSAQKARRYSSEAANANAVLSSQLQYIFAVSRIAHYMKAMMRDKIGSFASAANVED
FLNRWLMKYVLLDDNASQEQKAQFPLREASVQVHEVPGRPGVYRAVSFLRPHFQLDELTV
SLRLVAELPKTAP
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgtccgctcaactgcaagcagtggcgctgcccgtcgtcacggatggcgcggcgctgctg
gacgagatcgtcgaacgcagcaaggtcgccaagtccagcgccgagcatgcgcgcgccaag
gacatcatcggcgagctggtgaaccaggtgctgaaaggcacggtgatcgtgtcgcacaac
ctgtcggcaacgatcgaccgccgcgtggcggagctggaccggctgatctccgagcagctg
tccgcgatcatgcatgcgccggcgttccagaagctcgagcagagctggacgggcctgcac
tacctggtgcgcaacacggccaccgggccgggcctgaaggtgcgcatgctgaacgcgacc
aagcgcgaactggtgcgcgacttccagagcgcgctggagttcgaccagagcgccatgttc
aagaaggtgtacgaggaggagttcggcaccttcggcggcgcgccgtatgccgcgctgctg
ggcgacttcgagatctcgcgccagccggaagacatgtacctgatcgagcaaatgtcgcac
gtggccgccgccgcgcatgcaccatttgtcacggccgcgtcgcccgagctgttcggcctc
gaaggcttcggcgacctgggcaagccgcgcgacctggccaaggtcttcgacacgatggag
tatgcgaagtggaaggcgttccgcgaatcggaggatgcgcgctacgtgggcctgacgttg
ccgcgcttcctggggcggctgccgttcaacccggtcgacggcaccaccgtcgacggtttc
aatttcgtcgaggaggtcgacggcacggaccacggtaaatacctgtggtgtaacgccgcc
tacgcgttcggcgccaagctgaccaaggctttcgaggaattcggctggtgcgcggccatt
cgcggcgtcgagggcggcggtctcgtggacgacctgccgacgcacacgttcaagacggac
gaaggcgaggtcgcgctgaaatgcccgaccgaggtcgccatcaccgaccggcgcgagaag
gaactatcggaccagggcttcatctcgctggtgcattgcaagaacaccgcgtacgccgcg
ttcttcggcgcgcagtcggcccagaaggcgcgccgctacagcagcgaagcggccaacgcg
aatgccgtgctgtcgtcgcagctgcagtacatctttgccgtctcccggatcgcgcactac
atgaaggccatgatgcgcgacaagatcggcagcttcgcctccgcggcgaacgtcgaggac
ttcctgaaccgctggctgatgaagtacgtgctgctcgacgataacgcgagccaggaacag
aaggcgcaattcccgctgcgcgaagcgtcagtgcaggtgcacgaggtgccgggccgcccg
ggcgtgtaccgcgccgtcagcttcctgcggccgcacttccagctcgacgagcttaccgtc
tcgctccgcctcgtggcggaactgccgaagacggccccctga

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