Pseudoduganella flava: GO485_09565
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Entry
GO485_09565 CDS
T06346
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
mfla
Pseudoduganella flava
Pathway
mfla02020
Two-component system
mfla02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mfla00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GO485_09565
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GO485_09565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfla03021
]
GO485_09565
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
mfla02035
]
GO485_09565
Transcription machinery [BR:
mfla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GO485_09565
Bacterial motility proteins [BR:
mfla02035
]
Flagellar system
Flagellar assembly proteins
Stator
GO485_09565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR
PhyR_sigma-like
UPF0122
Motif
Other DBs
NCBI-ProteinID:
QGZ39270
UniProt:
A0A562PTE0
LinkDB
All DBs
Position
complement(2308890..2309621)
Genome browser
AA seq
243 aa
AA seq
DB search
MYTVKGKVNKDSLLTEHMPLVKRLAHHMKAKLPPSVEVDDLVQAGMIGLLDAINRYEETH
GAQFETYAVMRIRGAMLDELRSSDWMPRTMRQDMRKIENAMAVLQQKLGRPPSESEVAKS
LKLSLEDYQEMLSEGGGHQLVYYEDFHDEDGNDSFLDRYAHDEDADPLRALMDTNFRQAV
IDAIDALPPREKLLMGLYYEEELNLKEIGAVMGVSESRVSQLHTQAVSRLRATLREQAWT
GPA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgtacacggtcaaagggaaggtgaacaaggattcgctgctgacggagcacatgcccctc
gtaaagcgccttgctcaccacatgaaggcgaagttgccgcccagcgtggaagtggatgac
ctggtacaggcgggcatgatcggcctgctggacgcgatcaaccgctacgaagaaacgcac
ggcgcccagttcgaaacctatgcggtgatgcggatccgcggcgcgatgctcgacgagctg
cgcagcagcgactggatgccgcgcacgatgcggcaggacatgcgcaagatcgaaaacgcg
atggcggtgctgcagcagaagctggggcgcccgccatcggagtccgaggtcgccaagtcg
ctcaagctgtcgctcgaggattaccaggagatgctgtccgagggcggcggccaccagctc
gtgtactacgaggacttccacgacgaagacggcaacgacagcttcctcgaccgctatgcg
cacgacgaggatgccgacccgctgcgcgcgctgatggacaccaacttccggcaggcagtc
atcgatgcgatcgatgcattgccgccacgcgagaaactgctgatgggcttgtactacgaa
gaagaattgaatctgaaagagatcggcgccgtcatgggcgtctccgaatcacgcgtgtcg
cagctgcatacccaggccgtgtcgcggctgcgcgccacgttgcgggagcaggcatggact
ggtccagcgtag
DBGET
integrated database retrieval system
