Pseudoduganella flava: GO485_10965
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Entry
GO485_10965 CDS
T06346
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mfla
Pseudoduganella flava
Pathway
mfla03030
DNA replication
mfla03430
Mismatch repair
mfla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GO485_10965 (dnaE)
03430 Mismatch repair
GO485_10965 (dnaE)
03440 Homologous recombination
GO485_10965 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfla03032
]
GO485_10965 (dnaE)
03400 DNA repair and recombination proteins [BR:
mfla03400
]
GO485_10965 (dnaE)
Enzymes [BR:
mfla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GO485_10965 (dnaE)
DNA replication proteins [BR:
mfla03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GO485_10965 (dnaE)
DNA repair and recombination proteins [BR:
mfla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GO485_10965 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Mrr_cat
Pox_A8
Motif
Other DBs
NCBI-ProteinID:
QGZ39516
UniProt:
A0A562PWE4
LinkDB
All DBs
Position
complement(2633857..2637417)
Genome browser
AA seq
1186 aa
AA seq
DB search
MSTETLVSPDEQPVIQPDEPAAPPGPAFVHLRVHSEYSIVDGLVRIDDLVKAAVKDKQAA
LAVTDLSNLFGMVKFYKAARGKGVKPIIGTDVWITNDDNRDKPSRLILLAKNRMGYLQLC
ELLSLAWLTNQYKGRAEIRTEWLAELKDKQYDLMPGESGADGLIALSGAHFGDIGQAIDN
GNLELAEKQAEKWSAIFPGHFYVEICRAGQPNQEAQVRHSVALAAKLRLPVVATHPVQFM
SQEEFIAHEARICIAEGEMIANAKRVKRFNEQMRFLTQEEMQILFEDLPAALENTVEIAK
RCNVILTLGKPQLPNFPTPGMTIDEFLIAETKKGLEERLVQLFPDPVYREKMRPRYEERL
AFENQTIIKMKFPGYFLIVAEFIQWGKNNGVPIGPGRGSGAGSLVAYCLKITDLDPLKYN
LLFERFLNPERVSMPDFDIDFCQEKRELVIQHVKDLYGRDAVSQIATFGTMAAKGAIRDV
GRVLDFGYNFCDGISKLIPFKPGKPVTIAEAIEEEPLLKERLENEEEVKQLLDLAQQVEG
ITRGIGMHAGGVLIAPGKLTDFCPLYTQSGDSGVVSQYDKDDVEAVGLVKFDFLGLTTLT
ILDRAVNYIRELDPADKDFDLAKVPLDDRGSYDLLTKAKTVAVFQLESRGMQGMLKDARP
DRFEDIIALVALYRPGPMDLIPDFCKRKHGEKFDYPDPRTEGILSETYGIMVYQEQVMQM
AQIIGGYSLGGADMLRRAMGKKKAEEMAEHREIFRKGAGERGLTVEKADEIFDLMEKFAG
YGFNKSHAAAYALLSYHTAYLKQHHTAAFMAANMSLTMDDTEKVKILVEDAIEVCNLTIL
PPDINLSAYRFRPDGPPPSVTGKKVNAIRYGLGGVKGAGQNAIEAIIAARETGGPFTSLF
DFCKRVDKKQINRRTIEALIRSGAFDSFGVDRSVLFASVGFAMECAEQEARAANQVSLFG
GDDSDLVAPPEYVQATPWTDRQKLAEEKIALGYYLSGHMFDSYAAEARRFARTKLSELEP
SREPRMMCGVITGIRTQMTQRGKILIVSLDDKSAVVEVTVYNEIFEANKKCFKEDEFLAV
VGKVSEDRFTGGLRISAEKVYDIVAARLQFGRQLGWLLPDAVPPAKLRDILTPHRDDYGL
PVQMRIRPQGIDCTVQLGDDWRIAPSDELKLALEQLLGAKDVAVEY
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgaaacccttgtatcgcccgatgagcagccagtcatccagcccgacgaaccg
gcggcgcccccaggccccgctttcgtccacctgcgggtgcactcggaatactcgatcgtc
gacggcctggtgcgcatcgacgacctcgtcaaggccgcggtcaaggacaagcaggcggcg
ctggccgtcaccgacctgtcgaacctgttcggcatggtcaagttctacaaggccgcgcgc
ggcaagggcgtcaagccgatcatcggcacggacgtgtggatcaccaacgacgacaaccgc
gacaagccgtcgcgcctgatcctgctggcgaagaatcgcatgggctatctgcagctgtgc
gagctgctgtcgctggcatggctgacgaaccagtacaagggccgcgccgagatccgcacc
gaatggctggcggaactgaaggacaagcagtacgacctgatgcccggcgagagcggcgcc
gatggcctgatcgcgctgtccggcgcgcacttcggcgacatcggccaggcgatcgacaac
ggcaacctggagctggcggaaaagcaggcggagaaatggtcggcgatcttccccggccac
ttctacgtcgagatctgccgcgccggccagccgaaccaggaagcgcaggtgcgccactcg
gtagcgctggccgccaagctgcgcctgccggtcgtggcgacgcatcctgtgcagttcatg
tcgcaggaagaattcatcgcgcacgaggcgcgcatctgtatcgccgagggcgagatgatc
gcgaacgccaagcgcgtgaagcgtttcaacgagcagatgcgcttcctgacgcaggaagag
atgcagatcctgttcgaggacctgccggccgcgctggaaaacaccgtcgagatcgcgaag
cgctgcaacgtcatcctcacgctgggcaagccgcagctgccgaacttccccacgccgggc
atgacgatcgacgaattcctgatcgccgaaacgaagaagggcctggaagagcgcctggtg
cagctgttcccggacccggtctaccgcgagaagatgcgcccgcgctacgaggaacggctc
gcgttcgagaaccagaccatcatcaagatgaagttccctggctacttcctgatcgttgcg
gagttcatccagtggggcaagaacaacggcgtgccgatcggcccgggccggggctcgggc
gcgggttcgctggtcgcgtactgcctgaagatcacggaccttgacccgctcaagtacaac
ctgctgttcgaacgtttcctgaaccctgaacgggtatcgatgcccgacttcgacatcgac
ttttgccaggaaaagcgcgaactggtgatccagcacgtgaaggacctgtacggccgcgac
gccgtgtcgcagatcgccacgttcggcacgatggcggcgaagggcgcgatccgcgacgtg
ggccgcgtgctggacttcggctacaacttctgcgacggcatctcgaagctgatcccgttc
aagcccggcaagcccgtgacgatcgccgaggcgatcgaggaagagccgctcttgaaggaa
cgcctcgagaacgaggaggaagtgaagcagttgctggacctggcgcagcaggtggaaggc
atcacgcgcggcatcggcatgcacgccggcggcgtgctgatcgcgccgggcaagctgacc
gacttctgcccgctgtacacgcagtcgggcgactcgggcgtcgtgtcgcagtacgacaag
gatgacgtggaagccgtcggcctcgtgaagttcgacttcctgggcctgacgacgctgacg
atcctcgaccgcgcggtgaactacatccgcgaactggacccggccgacaaggacttcgac
ctggccaaggtgccgctggacgatcgcggctcgtacgacctgctgaccaaggcgaagacc
gtcgccgtgttccagcttgaatcgcgcggcatgcagggcatgctgaaagacgcgcggccc
gaccgcttcgaggacatcatcgcgctcgtcgccttgtaccgtccgggcccgatggacctg
atccccgacttctgcaaacggaaacacggcgagaagttcgactatcccgatccgcgtacc
gagggcatcctgtccgagacctacggcatcatggtctaccaggagcaggtgatgcagatg
gcgcagatcatcggcggctactcgctgggcggcgccgacatgctgcgccgcgcgatgggc
aagaagaaggccgaggagatggccgagcaccgcgagatcttccgcaagggtgccggcgag
cgcgggctgacggtggaaaaggccgacgagatcttcgacttgatggagaagttcgcgggc
tacggcttcaacaagtcgcacgccgccgcgtacgcgctgctgtcgtatcacaccgcctat
ctgaagcagcaccacacggccgcgttcatggcagccaacatgtcgctgacgatggacgac
accgagaaggtcaagatcctcgtcgaggatgcgatcgaggtgtgcaacctgacgatcctg
ccgccggacatcaacctgtccgcataccgcttccgcccggacggcccgccgccttccgtg
accggcaagaaggtcaatgcgatccgctacggcctgggcggcgtgaagggcgccggccag
aacgcgatcgaggcgatcatcgccgcgcgcgagacgggcggaccgttcacgagcctgttc
gacttctgcaagcgcgtcgacaagaagcagatcaaccgccgcacgatcgaagcgctgatc
cgctccggcgcgttcgactctttcggggttgatcgttccgtgctgttcgcctccgtcggc
ttcgcgatggaatgcgccgagcaggaagcgcgtgccgccaaccaggtcagcctgttcggc
ggcgacgacagcgacctcgtcgccccgccggagtacgtgcaggccacgccgtggacggac
cgccagaagctcgccgaggaaaagatcgcgctgggctactacctgtccggccacatgttc
gacagctacgcggccgaggcacggcgcttcgcgcgcaccaagctctccgagctggagccg
tcgcgcgagccgcgcatgatgtgcggcgtgatcacgggcatccgcacgcagatgacccag
cgcggcaagatcctgatcgtgtcgctggacgacaagagcgccgtcgtcgaagtcaccgtg
tacaacgagatcttcgaggcgaacaagaagtgcttcaaggaagacgagttcctggccgtc
gtcggcaaggtgtcggaagaccgcttcacgggcggcctgcgcatctcggccgagaaggtg
tacgacatcgtggcggcgcgcctgcagttcggccgccagctgggctggctgctgccggac
gccgtgccgcccgccaagctgcgcgacatcctgacgccgcaccgcgacgactatggcctg
ccggtgcagatgcgcatccgcccgcagggcatcgactgcacggtgcagctgggcgacgac
tggcgcatcgcgccttccgacgaactgaaactcgcactggagcagctgctgggcgcgaag
gatgtggcggtggagtactga
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integrated database retrieval system
