Pseudoduganella flava: GO485_11020
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Entry
GO485_11020 CDS
T06346
Name
(GenBank) cyclic nucleotide-binding domain-containing protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
mfla
Pseudoduganella flava
Pathway
mfla02020
Two-component system
mfla02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mfla00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GO485_11020
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GO485_11020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mfla03000
]
GO485_11020
Transcription factors [BR:
mfla03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
GO485_11020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
GntR
Crp
MarR
HTH_IclR
HTH_24
DnaD_N
HTH_Cmi2_C
HTH_69
TrmB
Rrf2
Motif
Other DBs
NCBI-ProteinID:
QGZ39524
LinkDB
All DBs
Position
2651718..2652467
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AA seq
249 aa
AA seq
DB search
MTTSSEQPGSAASAVPKDGEPTTTQNVHVHLRNIPLLSGLSDQEILSIKSELRFRQYGKR
EVVLQKGGAGDGLLFLLSGQMQVIDITEDGRAIGLRMLSPGDFFGEIAVITGSQRTASVV
AMTPVLVAFLPAPAALHLFSHSPSVANQMLRHLAEKIQRDSAFRSLLSINNTSRRIYTYL
AQMKKTQPGQPDVVENLPTHQDIANMINTSRETVTRALLTLTQQGIVQKDTHRLIILKPA
DLQKLVEGG
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgtcttccgaacaacccggttccgccgcgagcgccgtaccgaaagatggcgag
cccacgacgacgcagaatgtgcacgtccatctgcgcaatattccgctgctgtccgggctt
tccgaccaggagatcctgagcatcaagtcggaattgcgcttccgccaatacggcaagcgc
gaagtcgtgctgcaaaaaggcggggccggcgacggcctgctgttcctgctgtccggccag
atgcaggtgatcgacatcaccgaggatggccgcgcgatcggcctgcgcatgctgtcgccg
ggcgacttcttcggcgagatcgccgtgatcaccggctcgcaacgcaccgcatccgtcgtc
gcgatgacgccggtgctggtcgccttcctgccggcgcccgcggcgctgcacctgttctcc
cattcgccgtcggtcgccaaccagatgctgcggcacctggcggagaagatccagcgtgac
tcggcattccgctcgctgctcagcattaacaacacgtcacgccgtatctacacctatctg
gcgcaaatgaagaagacgcagccgggccagccggacgtcgtcgaaaacctgccgacgcac
caggatatcgcgaacatgatcaataccagccgggaaacggtgacccgtgcgctgctgaca
ctgacgcagcagggcatcgtgcagaaggacacgcatcggctgatcatcctgaagcccgcc
gacctgcaaaagctggtcgaaggcggatga
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